Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1973 86.0 5e-12 >seq1973 Length=9094 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || || |||||||||| | || | ||||| Sbjct 5891 AGAACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAGAGTGTGCGGCCGTCC 5832 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||| ||||| ||| | ||||| |||||||||||| || | |||||| ||||| Sbjct 5831 TCGAGTTGCTTGCCGGCAAAGATAAGGCGCTGTTGGTCCGGTGGGATGCCCTCCTTGTCC 5772 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | ||| || | | | | || || | || || ||| | |||||||| Sbjct 5771 TGAATCTTCGACTTGACATTGTCGATGGTATCACTGGATTCGACTTCGAGAGTGATGGTC 5712 Query 16904 TTTCCGGTCAGCGTTTTGAC 16923 || || |||| || ||||| Sbjct 5711 TTGCCAGTCAAGGTCTTGAC 5692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405039869089510