Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq1973 86.0 5e-12
>seq1973
Length=9094
Score = 86.0 bits (94), Expect = 5e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || || |||||||| || || |||||||||| | || | |||||
Sbjct 5891 AGAACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAGAGTGTGCGGCCGTCC 5832
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | ||| ||||| ||| | ||||| |||||||||||| || | |||||| |||||
Sbjct 5831 TCGAGTTGCTTGCCGGCAAAGATAAGGCGCTGTTGGTCCGGTGGGATGCCCTCCTTGTCC 5772
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
||| | | ||| || | | | | || || | || || ||| | ||||||||
Sbjct 5771 TGAATCTTCGACTTGACATTGTCGATGGTATCACTGGATTCGACTTCGAGAGTGATGGTC 5712
Query 16904 TTTCCGGTCAGCGTTTTGAC 16923
|| || |||| || |||||
Sbjct 5711 TTGCCAGTCAAGGTCTTGAC 5692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405039869089510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |