Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq1973 84.2 2e-11
>seq1973
Length=9094
Score = 84.2 bits (92), Expect = 2e-11
Identities = 89/115 (77%), Gaps = 2/115 (2%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
||||| | || || ||||||| ||| | ||||||||||| ||||||||||| || ||
Sbjct 6362 CCTCCACGAAGGCGAAGCACCAAATGCAAAGTGCTCTCCTTTTGAATGTTGTAGTC-GCT 6304
Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014
| || || | || ||||||||||||||||| || |||| ||||| ||||||
Sbjct 6303 GAGGGTACGACCATCCTCCAATTGCTTGCCGGCGAAAATCAATCGCTGTTGATCC 6249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397015222658698
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |