Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq361 86.0 1e-11 >seq361 Length=20236 Score = 86.0 bits (94), Expect = 1e-11 Identities = 164/241 (68%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 330383 TGATAGAACGTCCCCATTTTACGCCATTGACAATCGACTCGAAATCATCGTTCAGGATGA 330442 ||| || |||||||| | | | |||||||| || | ||| | ||||| || | || Sbjct 4641 TGACAGCTCGTCCCCACATCATAGCTTTGACAATGGAGTTGAAGTTATCGTCCATCAAGA 4700 Query 330443 CGATGTCGGCTGATTCCTTTGCAATATCTGTTCCAC---TCCCCATGGCACATCCAACGT 330499 |||| | | || ||||| |||| || || ||| | ||||| | ||||||| | Sbjct 4701 TGATGGCAGATGCCTCCTTCGCAACCTCCGTACCAGCGATACCCATAGAGAATCCAACAT 4760 Query 330500 CTGCCTCCTTAAGAGCCGGAGCATCGTTAGCACCATCGCCACTCGATGCAACGACATGAC 330559 | || ||| ||||| ||||||||||| | |||||| ||| | ||||| | || Sbjct 4761 CGGCGGTCTTGAGAGCAGGAGCATCGTTGGTACCATCTCCAGTGACAGCAACAGTCTCAC 4820 Query 330560 CAAGATCTTTCATGAGCTGAACAAGTTCATACTTATCCTCTGGGGATGAACGAGCAAGAA 330619 | || || || | | ||| |||||| | |||||| || ||| || |||||||||| Sbjct 4821 CGAGTTCCTTGAGGCGCTTAACAAGAATACGCTTATCTTCGGGGCTGGATCGAGCAAGAA 4880 Query 330620 C 330620 | Sbjct 4881 C 4881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102742240293150