Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq361 86.0 1e-11
>seq361
Length=20236
Score = 86.0 bits (94), Expect = 1e-11
Identities = 164/241 (68%), Gaps = 3/241 (1%)
Strand=Plus/Plus
Query 330383 TGATAGAACGTCCCCATTTTACGCCATTGACAATCGACTCGAAATCATCGTTCAGGATGA 330442
||| || |||||||| | | | |||||||| || | ||| | ||||| || | ||
Sbjct 4641 TGACAGCTCGTCCCCACATCATAGCTTTGACAATGGAGTTGAAGTTATCGTCCATCAAGA 4700
Query 330443 CGATGTCGGCTGATTCCTTTGCAATATCTGTTCCAC---TCCCCATGGCACATCCAACGT 330499
|||| | | || ||||| |||| || || ||| | ||||| | ||||||| |
Sbjct 4701 TGATGGCAGATGCCTCCTTCGCAACCTCCGTACCAGCGATACCCATAGAGAATCCAACAT 4760
Query 330500 CTGCCTCCTTAAGAGCCGGAGCATCGTTAGCACCATCGCCACTCGATGCAACGACATGAC 330559
| || ||| ||||| ||||||||||| | |||||| ||| | ||||| | ||
Sbjct 4761 CGGCGGTCTTGAGAGCAGGAGCATCGTTGGTACCATCTCCAGTGACAGCAACAGTCTCAC 4820
Query 330560 CAAGATCTTTCATGAGCTGAACAAGTTCATACTTATCCTCTGGGGATGAACGAGCAAGAA 330619
| || || || | | ||| |||||| | |||||| || ||| || ||||||||||
Sbjct 4821 CGAGTTCCTTGAGGCGCTTAACAAGAATACGCTTATCTTCGGGGCTGGATCGAGCAAGAA 4880
Query 330620 C 330620
|
Sbjct 4881 C 4881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102742240293150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |