Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1315 190 2e-43 >seq1315 Length=11532 Score = 190 bits (210), Expect = 2e-43 Identities = 421/629 (67%), Gaps = 2/629 (0%) Strand=Plus/Minus Query 94003 TGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCC 94062 ||||| | || ||||| |||| || || || || ||| ||| ||| | ||||| Sbjct 956 TGTGCCATGATTTCAAAGAACGCTGGTGGTATTGGTCTCAATGTTCACAGAATCCGTGCA 897 Query 94063 AGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGG 94122 | ||| | ||||| ||||| || || | ||||||||| |||| |||||||| || Sbjct 896 ACCGGTGCTTACATTGCTGGTACAAACGGAAACTCCAACGGAATCGTTCCTATGCTTCGA 837 Query 94123 GTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTC 94182 || ||||||||| | || || || || || || |||||| | | | ||| ||||| Sbjct 836 GTTTTCAACAACACCGCCCGATATGTTGATCAAGGTGGTAACAAGCGTCCTGGTGCTTTC 777 Query 94183 GCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAAC 94242 || | || || ||||| |||||||| || || | ||| ||||||| ||||||||| Sbjct 776 GCCATTTACCTTGAGCCATGGCACGCTGATGTTTTCGAGTTCCTCGACCTCCGAAAGAAC 717 Query 94243 CACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTT 94302 ||||| || || || | ||| | || |||||||||||||||||| | ||||| || Sbjct 716 CACGGAAAGGAGGAGGTTCGTGCCCGTGATCTCTTCTACGCTCTCTGGATTCCAGATCTC 657 Query 94303 TTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCC 94362 || ||||| || || || || ||| || ||||| | | || || || || ||||| Sbjct 656 TTCATGAAGCGTGTTGAAAAGAACCTCGACTGGACATTGATGTGCCCTAACGAGTGTCCT 597 Query 94363 GGACTGTCCGACGTTTGTGGATCGCG-TTTTGAAGACTTGTATGCTCGTTACGAATCGCA 94421 || || ||||||| | || | || || || | ||||||| ||||| || | Sbjct 596 GGCTTGGCCGACGTCTACGG-TGACGAGTTCGAGGCTTTGTATGAGAAATACGAGTCTGA 538 Query 94422 GGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACA 94481 |||||||| | || || | || ||||| ||| | ||| | || | || Sbjct 537 GGGCAAGGGTCGTAAAAGCATCAAGGCCCAAAAGCTTTGGTACTCTATCCTCGAGGCTCA 478 Query 94482 GGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCA 94541 ||||| || | || | ||| | | |||||| || |||| ||| |||||| Sbjct 477 AACTGAGACCGGAAACCCTTTCATGCTTTACAAGGATGCTTGCAACCGAAAGAGCAACCA 418 Query 94542 GCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTC 94601 || | || || ||| |||||| || |||| || ||||||||||| || | | Sbjct 417 AAAGAATCTTGGTACCATCCGGAGCTCCAACTTGTGTACTGAGATTGTCGAATACTGTGC 358 Query 94602 TCCGGACGAGATTGCTGTGTGTAACCTGG 94630 || || ||| ||||||| || ||| ||| Sbjct 357 ACCTGATGAGGTTGCTGTTTGCAACTTGG 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494662911794040