Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2965 118 2e-21
>seq2965
Length=6591
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973
|| || ||||| || |||||| ||| || |||||||| || ||||| |||||||||||
Sbjct 6021 AAGAGAAGGCATGCGAAGTCGGTGTGGAGACCCTCGTCACGGGAGATCAACTCGTTGGAG 5962
Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033
| | | || || | ||||| |||||| || | ||| || |||| || |||| |||
Sbjct 5961 AAGGTAAGACCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCA 5902
Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093
|| || ||||| ||||| ||||| ||||| || ||||| | | | |||| | | |
Sbjct 5901 CTGAAGAAGATACCCTCAACGGCAGCAAAGGCAACGAGACGTTGAGCAAAGGTAGACTCC 5842
Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGG 160143
|||| ||| |||| | ||||| || |||||||| |||||| ||
Sbjct 5841 TTGTCTTGGATCCATCGGACAGCCCAATCGGCCTTCTTCTTGATGCAAGG 5792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795058300399440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |