Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2965 118 2e-21 >seq2965 Length=6591 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || ||||| || |||||| ||| || |||||||| || ||||| ||||||||||| Sbjct 6021 AAGAGAAGGCATGCGAAGTCGGTGTGGAGACCCTCGTCACGGGAGATCAACTCGTTGGAG 5962 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | || || | ||||| |||||| || | ||| || |||| || |||| ||| Sbjct 5961 AAGGTAAGACCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCA 5902 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || || ||||| ||||| ||||| ||||| || ||||| | | | |||| | | | Sbjct 5901 CTGAAGAAGATACCCTCAACGGCAGCAAAGGCAACGAGACGTTGAGCAAAGGTAGACTCC 5842 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGG 160143 |||| ||| |||| | ||||| || |||||||| |||||| || Sbjct 5841 TTGTCTTGGATCCATCGGACAGCCCAATCGGCCTTCTTCTTGATGCAAGG 5792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795058300399440