Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq281 93.3 2e-13
>seq281
Length=21818
Score = 93.3 bits (102), Expect = 2e-13
Identities = 185/274 (68%), Gaps = 9/274 (3%)
Strand=Plus/Minus
Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390
|| || || ||||| ||||| ||| ||||||| ||||| || || ||||| || || |||
Sbjct 9691 ACAGTCCCAGCTTACTTCAACGATTCACAACGTCAAGCCACCAAGGATGCTGGTCAAATT 9632
Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450
|| ||| | || ||||| || | | || || || || || ||||| || |||||||||
Sbjct 9631 GCCGGTCTTAACGTTCTGAGAGTGGTCAACGAGCCAACTGCTGCTGCGCTTGCATATGGA 9572
Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510
|| | | ||| | || || || | || ||| | ||||| |||||||||
Sbjct 9571 CT-------TGAGAAGGA--TGAGGACAAGATCATCGCAGTCTACGATTTGGGTGGAGGA 9521
Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570
|| |||| || || || || | | || || || || || ||| | |||||
Sbjct 9520 ACCTTCGATATCTCCGTTCTCGAGATCCAGAAGGGTGTGTTCGAGGTCAAGTCCACCAAC 9461
Query 451571 GGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604
|| ||||| || | || ||||| ||| | ||||
Sbjct 9460 GGAGATACCCACTTGGGTGGTGAGGATTTCGATA 9427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975471614866892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |