Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq281 93.3 2e-13 >seq281 Length=21818 Score = 93.3 bits (102), Expect = 2e-13 Identities = 185/274 (68%), Gaps = 9/274 (3%) Strand=Plus/Minus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 || || || ||||| ||||| ||| ||||||| ||||| || || ||||| || || ||| Sbjct 9691 ACAGTCCCAGCTTACTTCAACGATTCACAACGTCAAGCCACCAAGGATGCTGGTCAAATT 9632 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 || ||| | || ||||| || | | || || || || || ||||| || ||||||||| Sbjct 9631 GCCGGTCTTAACGTTCTGAGAGTGGTCAACGAGCCAACTGCTGCTGCGCTTGCATATGGA 9572 Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510 || | | ||| | || || || | || ||| | ||||| ||||||||| Sbjct 9571 CT-------TGAGAAGGA--TGAGGACAAGATCATCGCAGTCTACGATTTGGGTGGAGGA 9521 Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570 || |||| || || || || | | || || || || || ||| | ||||| Sbjct 9520 ACCTTCGATATCTCCGTTCTCGAGATCCAGAAGGGTGTGTTCGAGGTCAAGTCCACCAAC 9461 Query 451571 GGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 || ||||| || | || ||||| ||| | |||| Sbjct 9460 GGAGATACCCACTTGGGTGGTGAGGATTTCGATA 9427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975471614866892