Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1973 131 4e-25
seq47 109 1e-18
>seq1973
Length=9094
Score = 131 bits (144), Expect = 4e-25
Identities = 140/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||| ||||| || ||||| |||||||| | ||||| | ||||| |||
Sbjct 5604 ACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAATCAGATAGAGTACGACCATCCTCG 5545
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| | ||||| |||||||| || || || || ||||| ||
Sbjct 5544 AGCTGCTTTCCGGCAAAGATCAAGCGTTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGG 5485
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || ||||||||||| || || || ||||| | |||||
Sbjct 5484 ATCTTGCTCTTGACGTTGTCTATGGTGTCCGACGACTCTACCTCGAGGGTGATGGTCTTA 5425
Query 195112 CCTGT 195116
|| ||
Sbjct 5424 CCGGT 5420
>seq47
Length=33200
Score = 109 bits (120), Expect = 1e-18
Identities = 137/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988
|| || || ||||| || ||||| || || || ||||| || | ||| || | || ||
Sbjct 24291 AAGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGTCCGTCC 24232
Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
||||| ||||| || |||||||| | || ||||| || || ||||| || || |||||
Sbjct 24231 TCGAGTTGCTTTCCAGCGAAGATCAAACGCTGTTGATCCGGTGGAATTCCCTCCTTGTCC 24172
Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108
||||| || ||| || || || |||||||||||| || || || ||||| | |||
Sbjct 24171 TGAATCTTGGACTTAACATTATCGATGGTGTCCGAAGACTCAACCTCTAGGGTGATGGTC 24112
Query 195109 TTTCCTGT 195116
|| || ||
Sbjct 24111 TTGCCCGT 24104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109343015693483
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |