Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1973 98.7 2e-15
>seq1973
Length=9094
Score = 98.7 bits (108), Expect = 2e-15
Identities = 147/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || | ||| ||||| || || ||||| || || |||||||
Sbjct 5624 TACCGCCACGAAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAATCAG 5565
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||||| | | ||| || || || || ||||| |||||||| | | ||| || ||||| |
Sbjct 5564 ATAGAGTACGACCATCCTCGAGCTGCTTTCCGGCAAAGATCAAGCGTTGCTGGTCTGGGG 5505
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760
| ||||| ||||| || || ||| ||||| || || || || || || || | |||
Sbjct 5504 GGATTCCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCTATGGTGTCCGACGACTCT 5446
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGT 82786
|| || | || || ||||| || ||
Sbjct 5445 ACCTCGAGGGTGATGGTCTTACCGGT 5420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981704560884911
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |