Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2965 100 3e-16 >seq2965 Length=6591 Score = 100 bits (110), Expect = 3e-16 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || || | ||| || || |||||| ||||||||| || ||||| ||||| Sbjct 5579 GCTCGAGGAGGTTCTCGTTGACAATTCCGTCGGAGGCAGCGAAGAAAGCGAGGACGTGGG 5520 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||| | ||||| | ||||| || || ||||||||||| | | |||||||| | Sbjct 5519 AGATGAAGTAGCGTTCGTCATCGTTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGAAA 5460 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 || ||||||||| | ||||| | || | | |||||||||||| ||||| |||| Sbjct 5459 GATCAATCTCTTCGGCGGTCCAGAAAGAAGCTTCGGCCTTCTTGTACATTTGCC--AGAT 5402 Query 110892 CT 110893 || Sbjct 5401 CT 5400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445040159683680