Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2965 93.3 1e-13 >seq2965 Length=6591 Score = 93.3 bits (102), Expect = 1e-13 Identities = 118/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768 || || || || ||||||| || || || | || || || || |||| || ||||| Sbjct 5861 CGTCTCGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGTGGTT-CTTTCGCATCCAT 5919 Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828 |||||||||||| |||||||| || ||| ||||| ||||| ||||| ||||| Sbjct 5920 CTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAGTTGATCTC 5979 Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 || ||||||||| | || ||||||||| || ||||||| Sbjct 5980 CCGTGACGAGGGTCTCCACACCGACTTCGCATGCCTTCTCT 6020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588137602439305