Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq2965 93.3 1e-13
>seq2965
Length=6591
Score = 93.3 bits (102), Expect = 1e-13
Identities = 118/161 (73%), Gaps = 1/161 (1%)
Strand=Plus/Plus
Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768
|| || || || ||||||| || || || | || || || || |||| || |||||
Sbjct 5861 CGTCTCGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGTGGTT-CTTTCGCATCCAT 5919
Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828
|||||||||||| |||||||| || ||| ||||| ||||| ||||| |||||
Sbjct 5920 CTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAGTTGATCTC 5979
Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
|| ||||||||| | || ||||||||| || |||||||
Sbjct 5980 CCGTGACGAGGGTCTCCACACCGACTTCGCATGCCTTCTCT 6020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588137602439305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |