Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq1973 84.2 2e-11 >seq1973 Length=9094 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 || || || ||| |||| ||| || || || || ||||| ||||| || |||||||| Sbjct 6229 GATAAGGAGGGTATTCCACCGGATCAACAGCGATTGATTTTCGCCGGCAAGCAATTGGAG 6288 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | || | | | ||| |||||||| ||||| |||||||||||||||||||| | Sbjct 6289 GATGGTCGTACCCTCAGCGACTACAACATTCAAAAGGAGAGCACTTTGCATTTGGTGCTT 6348 Query 28003 CGTTTGCGTGGCGG 28016 || | ||||| || Sbjct 6349 CGCCTTCGTGGAGG 6362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355820117875323