Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1315 228 1e-54 >seq1315 Length=11532 Score = 228 bits (252), Expect = 1e-54 Identities = 689/1052 (65%), Gaps = 18/1052 (2%) Strand=Plus/Plus Query 76091 AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 76150 || ||||| || || || || || || | | |||||||||| || | |||| || Sbjct 130 AAAGCATCAGCAAGACCTTGGACGCCGAGAGCAATAGGTCTGTGACGGAAATTGCTCTTT 189 Query 76151 TCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACT 76210 || || |||| ||||| || || | ||| || || || || | ||| |||| || Sbjct 190 CTTGCCTCAGGAACTGGGTAGTAGTTGACATCGATGATCTTGTTCAAGTTTTTGACGACA 249 Query 76211 ACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCA-TCTA-TCACAAACATAT 76268 |||| || || | || || | || ||| | | || ||| ||| ||||||| Sbjct 250 ACTTGGCAGACTTCGTGAAGCTTCTGGAAGTCATAAGTGGCAGTCTTCTCATCAACATAT 309 Query 76269 TA----AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA-TATTG 76323 ||||| | ||||| | || ||||| || ||||||| || | || |||| Sbjct 310 GTTGGGAGAGCAAGCGATGCCAAGTTGCAAACAGCAACCTCATCAGG-TGCACAGTATTC 368 Query 76324 TATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTT 76383 | ||||| || || | || | | ||| || |||||||| | |||||||||||| Sbjct 369 GACAATCTCAGTACACAAGTTGGAGCTCCGGATGGTACCAAGATTCTTTTGGTTGCTCTT 428 Query 76384 TTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGAT 76443 | ||| || | ||||| ||||| | || || |||| || ||| | || | |||| Sbjct 429 TCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCGGTCTCAGTTTGAGCCTCGAG 488 Query 76444 AATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTT---CTCTCTTTC 76500 ||||| | ||| | | || || || | ||| | ||| ||| || Sbjct 489 GATAGAGTACCAAAGCTTTTGGGCCTTGATGCT---TTTACGACCCTTGCCCTCAGACTC 545 Query 76501 ATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTC 76560 |||| ||| || || || || || || | || || |||| |||||||| || Sbjct 546 GTATTTCTCATACAAAGCCTCGAACTCGTCACCGTAGACGTCGGCCAAGCCAGGACACTC 605 Query 76561 ATTCGGACACATCAATGACCACTC-ACCATCTTCCTTAACCCGTTTCATAAAGAGATCAG 76619 || || |||||||||| ||| || | |||| | ||| || ||||| |||||||| | Sbjct 606 GTTAGGGCACATCAATGTCCAGTCGAGGTTCTTT-TCAACACGCTTCATGAAGAGATCTG 664 Query 76620 GTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTT 76679 | ||||| ||||| || ||||| |||| | | || || ||||| |||||| Sbjct 665 GAATCCAGAGAGCGTAGAAGAGATCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTTC 724 Query 76680 TAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACAC 76739 || || |||||||| | || ||||| |||||||| || || || || || | | ||| Sbjct 725 GGAGGTCGAGGAACTCGAAAACATCAGCGTGCCATGGCTCAAGGTAAATGGCGAAAGCAC 784 Query 76740 CCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACA 76799 | || || || ||||| || ||||| | ||||| ||| ||||| || |||||| | || Sbjct 785 CAGGACGCTTGTTACCACCTTGATCAACATATCGGGCGGTGTTGTTGAAAACTCGAAGCA 844 Query 76800 TTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAA 76859 | |||| || ||||| || | || ||||| |||| ||| ||| || |||||| | Sbjct 845 TAGGAACGATTCCGTTGGAGTTTCCGTTTGTACCAGCAATGTAAGCACCGGTTGCACGGA 904 Query 76860 TATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCA 76919 | | || | || || || || || || | || || || | ||||| |||| Sbjct 905 TTCTGTGAACATTGAGACCAATACCACCAGCGTTCTTTGAAATCATGGCACAAATCTTCA 964 Query 76920 ATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACA 76979 ||||||||||||| || || || || || ||| |||||| | ||| || || || | Sbjct 965 ATGTGTCATAGATACCATCAATGCTGTCCTCCTTCATGTCGATAAGGAAGCATGATGAAA 1024 Query 76980 TTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTT 77039 ||| || || || ||| || | ||| || || || || ||||| |||| Sbjct 1025 GTTGTGCTTGTGGTGTACCAGCAGCGAAAAGTGTTGGTGAGGCGTGGGTGAAGTATTTGC 1084 Query 77040 CAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACA 77098 || | | ||||| || || || | || || |||||| || | || ||||| ||| Sbjct 1085 TGGACATCAAGTTGTAGGTCTCGATGGCAGCCTCAATATCCTCACCG-TGGATTCCGACA 1143 Query 77099 GCGACACGCATCAACATATGCTGAGGTCGTTC 77130 ||||||||||| | |||||| || || ||||| Sbjct 1144 GCGACACGCATAATCATATGTTGTGGACGTTC 1175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712847520031680