Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2036 91.5 3e-13
>seq2036
Length=314316
Score = 91.5 bits (100), Expect = 3e-13
Identities = 173/252 (69%), Gaps = 2/252 (1%)
Strand=Plus/Minus
Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC- 230445
|||| || || || || || | || | |||||| | ||| ||| |||| || |||
Sbjct 235849 TCATCACCGAGGCTGTCGAGATTGAGCAAGAGTTCTTGACTGAGGCTCTTCCTTG-CGCG 235791
Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
||| | |||||||| || | || ||| || ||||| || || || ||||| || ||
Sbjct 235790 CTTCTCGGCATGAATGCCAACCTGATGAAGCAATACATTGAGTTTGTCGCCGATCGTCTT 235731
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
| || | || || | ||||| || ||||| | ||||| || | || ||||||
Sbjct 235730 CTCCTTTCTCTCGGCAATGAGAAGGTTTACAAGGTTGCCAACCCATTCGACTTCATGGAG 235671
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
||| || || || ||||||||||||||||| ||||||||| ||| || || | |
Sbjct 235670 AACATCTCTCTCGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCTGATTACCAAAAG 235611
Query 230626 CCTGGTGTGATG 230637
| ||||| |||
Sbjct 235610 GCCGGTGTCATG 235599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057788883218330
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |