Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2036 91.5 3e-13 >seq2036 Length=314316 Score = 91.5 bits (100), Expect = 3e-13 Identities = 173/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC- 230445 |||| || || || || || | || | |||||| | ||| ||| |||| || ||| Sbjct 235849 TCATCACCGAGGCTGTCGAGATTGAGCAAGAGTTCTTGACTGAGGCTCTTCCTTG-CGCG 235791 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 ||| | |||||||| || | || ||| || ||||| || || || ||||| || || Sbjct 235790 CTTCTCGGCATGAATGCCAACCTGATGAAGCAATACATTGAGTTTGTCGCCGATCGTCTT 235731 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || | || || | ||||| || ||||| | ||||| || | || |||||| Sbjct 235730 CTCCTTTCTCTCGGCAATGAGAAGGTTTACAAGGTTGCCAACCCATTCGACTTCATGGAG 235671 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || || || ||||||||||||||||| ||||||||| ||| || || | | Sbjct 235670 AACATCTCTCTCGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCTGATTACCAAAAG 235611 Query 230626 CCTGGTGTGATG 230637 | ||||| ||| Sbjct 235610 GCCGGTGTCATG 235599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057788883218330