Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1157 111 2e-19 >seq1157 Length=81649 Score = 111 bits (122), Expect = 2e-19 Identities = 186/269 (69%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 145998 CTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTG 146057 ||| ||||| |||| || ||||| ||| | | || || || ||||||| || || Sbjct 23702 CTGATCCACTCCCTTACCTATATAATCCGTCGTAGCATCTACATATTCGGCCCCAAAATG 23643 Query 146058 CCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGC 146117 | ||| ||||| |||||||| || || ||||| ||| | | | ||| || ||| | Sbjct 23642 GCGCCATTGGAAGCCGTAGACTGGGCCTAGGTCTCCGACCGCGCGGTGGGAGAGGCCGAC 23583 Query 146118 CCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAG 146177 | | ||||| | || ||||| |||||| ||||||||||||||| ||| |||| ||| Sbjct 23582 GCTGTCGAGGTATTCGCGGGATCCGTTGCCGTCCCAGATCTTGATGCCGGCGGCGGTGAG 23523 Query 146178 CTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCA 146237 |||| ||||| || |||||||||||| || || ||| ||| | | Sbjct 23522 GGGGAGGGAGGAGGTGGAGCCTGAGATGAACCAGAGGAGTTCGGCGATGACGGCGCGGAG 23463 Query 146238 GAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||||| | || ||||| || ||||||| Sbjct 23462 GAAGACGCGTTTTGTGGTTAGGAGGGGGA 23434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590057688887640