Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq778 113 3e-20 >seq778 Length=242110 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||| ||| | |||||| || || || ||||| |||||| Sbjct 99563 CCACCGCGGAGACGAAGGACCAAGTGAAGAGTACTCTCCTTTTGGATGTTATAGTCGCTG 99504 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | |||||||| ||||||||||| ||||| |||||| || Sbjct 99503 AGGGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCGGGTGGG 99444 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||| || ||||| ||| | || | | || | || | |||||||| Sbjct 99443 ATACCCTCCTTATCCTGAATCTTAGACTTCACATTGTCGATTGTGTCTGAAGATTCGACC 99384 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| || ||||| ||||| || || ||||| ||||| Sbjct 99383 TCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 99337 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | ||||||||||| ||||| || || || || |||||||| ||| Sbjct 99792 TCCTCCACGAAGACGAAGCACCAGGTGCAAAGTGCTCTCCTTTTGAATGTTGTAATCGCT 99733 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| | || |||||||||||||||||||| || | ||||| || || || Sbjct 99732 GAGGGTACGACCATCCTCCAACTGCTTGCCTGCGAAGATCAATCGCTGTTGATCTGGTGG 99673 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||| || |||||| ||| | || | |||| || | || || || Sbjct 99672 AATACCCTCCTTATCCTGGATCTTTGACTTGACATTATCAATCGTGTCCGAAGACTCAAC 99613 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||| || | ||| || |||||||||||||| Sbjct 99612 TTCTAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAGATCTGCAT 99565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323061798092960