Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq2371 306 5e-78
seq2036 131 2e-25
>seq2371
Length=131994
Score = 306 bits (338), Expect = 5e-78
Identities = 1338/2075 (64%), Gaps = 48/2075 (2%)
Strand=Plus/Minus
Query 78708 CTTGTCCAA-TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766
|||| ||| |||||| || ||||| || || || | | ||||| |||||||||||||
Sbjct 29145 CTTGATCAACTGTGAACTGGATGGGTGCCGAGGCAGCCATTGTACGGAGATAGTACATTC 29086
Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826
| || || ||||| | |||| || |||||||||||| || | || | |
Sbjct 29085 CAGTCTTAAGACCCAACTTCCAGCCTGCGAAATGCATACTGGTAATCTTCCCCATGGTTG 29026
Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886
|||| || ||||| ||||| |||||| |||||| ||||| || || | ||| ||||
Sbjct 29025 GATCCTTCATGTGGATGTTCATTGATTGAGATTGATCAATGAACGCACCACGGTCGGCAG 28966
Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 78946
|||| | | ||| || ||||| |||||||||| ||| || |||| ||| ||||
Sbjct 28965 CCATCTGAACGATGGTACGTTGTGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATAT 28906
Query 78947 CTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003
| |||| | ||||| | || |||||||||||||| || || || || | || || |
Sbjct 28905 CAGCTGGGATGTTTGGAACGTTTTGAATGGATCCACCGTCAGCAATGATACGGTTTTTCA 28846
Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063
| | || ||| | | | || | | | | || || ||||| || ||||
Sbjct 28845 TGTTATCGGACCACAGTCCCATATCAACCAGATCCTTGAGAAGCCATGGATTGACAACTT 28786
Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123
| || ||||||| | || | |||| ||| || || ||| ||||| || | | |
Sbjct 28785 GGAACTCTCCAGCAAGAACACGTCGAGAGTAGATGTTGGAGGTGTATGGCTCGAAGCACT 28726
Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183
| || ||| | ||||||| || || ||||||||||| || || | ||||| |
Sbjct 28725 CGTTGAATCCAAGAATTTGACTGGTACTGGCAGTTGGCATAGGAGCGACGAGCAAACTGT 28666
Query 79184 TTCTAAGACCGTAT-GATCTGATTTTATCTTTTAGAGATT-CCCAATCCCAAAGATCAGA 79241
| | | ||| | | || | || | | |||| || | |||||||||||||||| |
Sbjct 28665 TGCGGATACCATGTTGAGCA-ATCTGCTGCTTTA-AGCTAGCCCAATCCCAAAGATCCGT 28608
Query 79242 CGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTA 79301
|| |||| ||| | |||||||| || || || || ||| ||| |||
Sbjct 28607 AGGTGTAACACCCCACATGTCATATTGGAGCTCGCCCTTGGAGGCAGGTGAGCCTTGGTA 28548
Query 79302 TGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATA 79361
|| ||||| | || | | | || || || || || || ||| ||
Sbjct 28547 AGTCTCATATGTACCATGAATCTTTGCCAACTCCATGGAAGCAGTCAAAGCAGCGTGGTA 28488
Query 79362 AATGGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTATCAAATGGATAAT 79420
|||||||||||| || | | ||||| | |||| || ||| || || |||||| |
Sbjct 28487 AATGGTTTCGAAGATTTGGATGTTGAGGTGCTTG-GCCTCTGGGGACTCGAATGGAAGAC 28429
Query 79421 TTAAGAG--AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 79478
||||| || ||| || || || | ||||| ||||||| | | |||||||| || |
Sbjct 28428 G-AAGAGCCAAGAAA-GCATCAGCAAGACCTTGGACACCAAGAGCAATAGGTCTGTGGCG 28371
Query 79479 CTTATTAGAAATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 79537
||| | |||| || || || | ||| || || || ||||| ||||| || || |
Sbjct 28370 GAAATT-GCTCTTTCTTGCCTCGGGCACAGGGTAGTAGTTGATATCGATAATCTTGTTCA 28312
Query 79538 GATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCA-AATCGTCCATCT 79596
||| |||| | |||| | || || | || || | || ||| || | | |||
Sbjct 28311 AGTTCTTGACGACAACTTGGCAGACCTCGTGAAGCTTCTGGAAGTCATAAGTGGCAGTCT 28252
Query 79597 ATTA--CAA-ACATGTTCAACGCGACAG--ATGCCAGATTACAAACGGCTACCTCATTAG 79651
| ||| | ||||| | | ||| |||||| || ||||| || ||||||| ||
Sbjct 28251 TCTCATCAACATATGTTGGGAGAGCCAGCGATGCCAAGTTGCAAACAGCAACCTCATCAG 28192
Query 79652 CATCCGCA-TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTT 79710
| | || |||| | |||||||| || | ||| | ||||| || | |||
Sbjct 28191 G-TGCACAGTATTCGACAATTTCAGTACACAAGTTGGAGCTTCGGATGGTACCAAGATTC 28133
Query 79711 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCA 79770
| ||| || |||||| ||| || |||||||| ||||| ||||| || | ||||| ||
Sbjct 28132 TTTTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCAGTCTCG 28073
Query 79771 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTC 79830
| |||| || | || | | ||| | | | ||||| || | |||| | |
Sbjct 28072 GTTTGAGCCTCGAGGATAGAGTACCAAAGCTTTTGGGCCTTGATGCT---CTTGCGGCCC 28016
Query 79831 TTTTC-TCTT--TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCT 79887
|| | || ||||||| || || ||||| ||||| || | || ||| |
Sbjct 28015 TTGCCCTCAGACTCGTATTTCTCGTACAAAGCCTCGAATTCGTCACCGTAGACGTCGGCC 27956
Query 79888 AATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT--ACTCGTT 79945
|| |||||||| || | ||| |||||||| | ||| || | || ||| || || |
Sbjct 27955 AAACCAGGACACTCATTAGGGCACATCAATGTCCAGTCAAGGT--TCTTTTCAACACGCT 27898
Query 79946 TCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCG 80004
|||| |||||||| |||||||| || || || ||| ||||| | || | | ||||||
Sbjct 27897 TCATGAAGAGATCTGGAATCCAGAGGGCGTAGAAA-AGATCACGGGCACGAACCTCCTCC 27839
Query 80005 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 80064
||||| |||||| || ||||||||| | | || ||| | ||||| || || | |
Sbjct 27838 TTTCCGTGGTTCTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCGAGG 27779
Query 80065 TATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 80124
|| ||||| | | | || ||||| ||||| || || ||||| | |||| |||||||||
Sbjct 27778 TAGATGGCGAAAGCACCAGGTCGCTTGTTACCACCTTGATCAACATATCGAGCGGTGTTG 27719
Query 80125 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 80184
|| |||| | | ||| |||| || || ||||| | || || || |||| || ||
Sbjct 27718 TTGAAAACCCGAAGCATAGGAACGATTCCGTTGGAGTTTCCGTTTGTACCGGCAATGTAA 27659
Query 80185 CTTCCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGA 80242
||| |||| || || | || |||| | || || || ||||| | || || |
Sbjct 27658 GCACCAGTGGCGCGGATTCTGTGAACATTGA--GTCCGATACCACCTGCGTTCTTTGAAA 27601
Query 80243 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAA 80302
| | || || || || || || ||||| || || ||||| || || |||||| |
Sbjct 27600 TCATGGCACAAATCTTCAAAGTGTCGTAGATACCATCAATGCTGTCCTCCTTCATGTCGA 27541
Query 80303 GTAGAAAACAGCTAGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAA 80361
|| || || ||| | ||| || | | || || ||| ||| | || || ||
Sbjct 27540 TGAGGAAGCATGAAGAAAGTTG-TGCCTGTGGTGTACCAGCAGCAAAAAGTGTTGGTGAG 27482
Query 80362 GCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC 80421
||||| || || | || |||| | ||||| || || || || | || ||||||
Sbjct 27481 GCGTGGGTGAAGTACTTGCTGGACATCAAGTTGTAAGTTTCGATGGCAGCCTCAATATCC 27422
Query 80422 CATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 80481
|| ||||| || ||||||||||| | ||| || || || | ||| |||||||
Sbjct 27421 TCGCCGTGTATTCCGACAGCGACACGCATGATCATATGTTGTGGACGTTCGCAGATCTTG 27362
Query 80482 TTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 80541
|| | | | || ||| || | || || |||||||| || | ||| |
Sbjct 27361 CCATCGAGGCGGAGGAGATATGATCGCTCGAGGGTCTTGAAACCAAAGTATTGGTAGTTA 27302
Query 80542 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC- 80600
|| || || ||||| | || | |||||||| | ||| | || | || |||
Sbjct 27301 AAATCACGGTCGTAGACGATGGCGGAGTTGAGCTCGGCCTCGTGCTTCATGACACAATCG 27242
Query 80601 CATGGTGATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA 80659
||| | | ||| || || || || ||| |||| ||| || ||||| | |
Sbjct 27241 TATGTT--TGTTTGCTGATCATTGGTGACAATTTTTGATTTCGAGGGTTGACATAATGGT 27184
Query 80660 ATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACG 80718
|||| || || || | | | ||| | || || |||| |||||| || || || ||
Sbjct 27183 ATAATTCGGAAATGAC-GCTCGAGAATTGCTTCTTGGTTTGCTTGTGGAGGTTCGAGACT 27125
Query 80719 GCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753
|| ||||| || || | ||||||||||| |||||
Sbjct 27124 GCAATTCTTGCTGCGAGGATGGCATAATCGGGATG 27090
>seq2036
Length=314316
Score = 131 bits (144), Expect = 2e-25
Identities = 339/515 (66%), Gaps = 9/515 (2%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| ||| | ||||| || ||||| || || || ||||| | | || || ||
Sbjct 235612 TTTTGGTAATCAGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCGAGAGAGATGTTC 235671
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
|||||||| || || || |||| ||| || |||| || | | || | |||||
Sbjct 235672 TCCATGAAGTCGAATGGGTTGGCAACCTTGTAAACCTTCTCATTGCCGAG---AGAAAGG 235728
Query 49789 AAT---CTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 49845
| | ||| |||||||| || || ||| ||||||| | |||||| || | |
Sbjct 235729 AGAAGACGATCGGCGACAAACTCAATGTATTGCTTCATCAGGTTGGCATTCATGCCGAGA 235788
Query 49846 AGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 49905
|| ||||||||| |||| | || ||||| ||||| || || || || ||
Sbjct 235789 AGCGCGCAAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCCTCGGTGATG 235848
Query 49906 ATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCG 49965
| | | || | | | | || || ||||| || || || | | ||||||
Sbjct 235849 ACTGCTTGGACTGCTGCCTTGCTTGGGCGATGCTTCAAGTGGGAGAAGAGAAGGCATGCG 235908
Query 49966 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGC 50025
|| ||| ||| |||||||| || | || | |||||||| || || || || | |
Sbjct 235909 AAGTCGGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAGGTAAGACCAGCC 235968
Query 50026 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCT 50085
|| ||||||||||| || | ||| || ||||| || || || ||| |||||||| ||
Sbjct 235969 ATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCACTGAAGAAGATACCC 236028
Query 50086 TCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCAC 50142
|| || || |||||||||||||| | | || | | | | |||| || |||||
Sbjct 236029 TCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAAGGTAGACTCCTTGTCTTGGATCCAT 236088
Query 50143 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177
||||||||| |||||||| || | |||||
Sbjct 236089 CGGACAGCCCAATCAGCCTTCTTCTTAATGCAAGG 236123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718245537069240
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