Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq778 104 2e-17 >seq778 Length=242110 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 |||||| | | || | ||||| ||||||||| |||||||| | ||| |||||||| Sbjct 99792 TCCTCCACGAAGACGAAGCACCAGGTGCAAAGTGCTCTCCTTTTGAATGTTGTAATCGCT 99733 Query 94840 CATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 | | || || |||||||| ||| || || | ||||| |||| || |||||||| Sbjct 99732 GA--GGGTACGACCATCCTCCAACTGCTTGCCTGCGAAGATCAATCGCTGTTGATCTGGT 99675 Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957 |||||||| || || || | || |||| |||||| | | ||||| | || Sbjct 99674 GGAATACCCTCCTTATCCTGGATCTTTGACTTGACATTATCAATCGTGTCCGAAGACTCA 99615 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||||| || || ||||| | ||| || |||||||||||||| Sbjct 99614 ACTTCTAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAGATCTGCAT 99565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448276680968760