Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2397 114 2e-21
seq2278 109 9e-20
>seq2397
Length=17041
Score = 114 bits (126), Expect = 2e-21
Identities = 109/137 (80%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || ||||||||||| |||||||||||||| ||
Sbjct 6604 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAAGGTATCACCAAGCCAGCCAT 6662
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | ||||| ||||||||||| || ||||||||| | || | || |||| || ||||
Sbjct 6663 CAGACGTCTCGCTCGTCGTGGAGGTGTCAAGCGTATTTCAGCCATGATCTACGAGGAGAC 6722
Query 16552 TCGTGATGTTTTGAAGA 16568
|| | |||| | ||||
Sbjct 6723 CCGCGGTGTTCTCAAGA 6739
>seq2278
Length=22643
Score = 109 bits (120), Expect = 9e-20
Identities = 85/99 (86%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || ||||||||||| ||||| ||||| || ||
Sbjct 2901 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAAGGTATCACAAAGCCTGCGAT 2959
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||||||||| || ||||||||||| ||||||||| ||||
Sbjct 2960 CCGTCGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTC 2998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79072831030563
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |