Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq2371 269 3e-67
seq2036 129 7e-25
>seq2371
Length=131994
Score = 269 bits (298), Expect = 3e-67
Identities = 1325/2075 (64%), Gaps = 48/2075 (2%)
Strand=Plus/Minus
Query 61985 CTTGTCCAA-TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62043
|||| ||| |||||| || ||||| || || || | | ||||| |||||||||||||
Sbjct 29145 CTTGATCAACTGTGAACTGGATGGGTGCCGAGGCAGCCATTGTACGGAGATAGTACATTC 29086
Query 62044 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62103
| || || ||||| | |||| || ||||||||||| || | || | |
Sbjct 29085 CAGTCTTAAGACCCAACTTCCAGCCTGCGAAATGCATACTGGTAATCTTCCCCATGGTTG 29026
Query 62104 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62163
|||| || ||||| ||||| |||||| |||||| ||||| || || | ||| ||||
Sbjct 29025 GATCCTTCATGTGGATGTTCATTGATTGAGATTGATCAATGAACGCACCACGGTCGGCAG 28966
Query 62164 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62223
|||| | | ||| || ||||| |||||||||| ||| || |||| ||| ||||
Sbjct 28965 CCATCTGAACGATGGTACGTTGTGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATAT 28906
Query 62224 CTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62280
| |||| | ||||| | || |||||||||||||| || || || || | || || |
Sbjct 28905 CAGCTGGGATGTTTGGAACGTTTTGAATGGATCCACCGTCAGCAATGATACGGTTTTTCA 28846
Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62340
| | ||| ||| | | | || | | | | || || ||||| || ||||
Sbjct 28845 TGTTATCGGACCACAGTCCCATATCAACCAGATCCTTGAGAAGCCATGGATTGACAACTT 28786
Query 62341 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62400
| || ||||||| | || | |||| ||| || || ||| || || || | |||
Sbjct 28785 GGAACTCTCCAGCAAGAACACGTCGAGAGTAGATGTTGGAGGTGTATGGCTCGAAGCACT 28726
Query 62401 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62460
| || ||| | ||||||| || ||||| |||||||| || || | ||||| |
Sbjct 28725 CGTTGAATCCAAGAATTTGACTGGTACTGGCAGTTGGCATAGGAGCGACGAGCAAACTGT 28666
Query 62461 TTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTT-CCCAATTCCAAAGATCCG 62517
| | | ||| ||||| | || | | |||| || | |||||| |||||||||||
Sbjct 28665 TGCGGATACC--ATGTTGAGCAATCTGCTGCTTTA-AGCTAGCCCAATCCCAAAGATCCG 28609
Query 62518 ACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACAT 62577
||| ||| ||| || || || ||| || ||| |
Sbjct 28608 TAGGTGTAACACCCCACATGTCATATTGGAGCTCGCCCTTGGAGGCAGGTGAGCCTTGGT 28549
Query 62578 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 62637
| || || |||| || | ||| || | || || || ||| ||| |
Sbjct 28548 AAGTCTCATATGTACCATGAATCTTTGCCAACTCCATGGAAGCAGTCAAAGCAGCGTGGT 28489
Query 62638 AAATGGTTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTATCAAATGGATAA 62696
|||||||||||||||| | | || || | |||| || || || || |||||| |
Sbjct 28488 AAATGGTTTCGAAGATTTGGATGTTGAGGTGCTTG-GCCTCTGGGGACTCGAATGGAAGA 28430
Query 62697 TTTAAGAG--AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62754
||||| || ||| || || || | ||||| ||||||| | | |||||||| || |
Sbjct 28429 CG-AAGAGCCAAGAAA-GCATCAGCAAGACCTTGGACACCAAGAGCAATAGGTCTGTGGC 28372
Query 62755 TCTTATTAGAGATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 62813
||| | |||| || || || | ||| || || || ||||| ||||| || ||
Sbjct 28371 GGAAATT-GCTCTTTCTTGCCTCGGGCACAGGGTAGTAGTTGATATCGATAATCTTGTTC 28313
Query 62814 AGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA--TCGCC--C 62869
| || |||| | |||| | || || | || || | || ||| | | || |
Sbjct 28312 AAGTTCTTGACGACAACTTGGCAGACCTCGTGAAGCTTCTGGAAGTCATAAGTGGCAGTC 28253
Query 62870 ATCTATTACAAACATGTTCA-AG-GCAACAGATGCCAGATTACAAACGGCTACCTCATTA 62927
||| | | | ||||| || || | ||||||| || ||||| || ||||||| |
Sbjct 28252 TTCTCATCAACATATGTTGGGAGAGCCAGCGATGCCAAGTTGCAAACAGCAACCTCATCA 28193
Query 62928 GCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATT 62986
| | | || |||| | || ||||| || | || | ||| || || | |||
Sbjct 28192 GG-TGCACAGTATTCGACAATTTCAGTACACAAGTTGGAGCTTCGGATGGTACCAAGATT 28134
Query 62987 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 63046
| ||| || |||||| ||| || |||||||| ||||| ||||| || | ||||| ||
Sbjct 28133 CTTTTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCAGTCTC 28074
Query 63047 AATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCT 63106
| |||| || | || | | ||| | | | ||||| || | ||| |
Sbjct 28073 GGTTTGAGCCTCGAGGATAGAGTACCAAAGCTTTTGGGCCTTGATGCTC---TTGCGGC- 28018
Query 63107 CCTTTCTCTT----TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63162
|||| | || |||||| ||||| ||||| ||||| || | || | |
Sbjct 28017 CCTTGCCCTCAGACTCGTATTTCTCGTACAAAGCCTCGAATTCGTCACCGTAGACGTCGG 27958
Query 63163 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63222
|||| |||||||| |||| || |||||||| | ||| || || | | || || |
Sbjct 27957 CCAAACCAGGACACTCATTAGGGCACATCAATGTCCAGTCAAGGTTCTTTTCAACACGCT 27898
Query 63223 TCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCG 63281
|||| |||||||| |||||||| || || || ||| ||||| | || | | |||||
Sbjct 27897 TCATGAAGAGATCTGGAATCCAGAGGGCGTAGAAA-AGATCACGGGCACGAACCTCCTCC 27839
Query 63282 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63341
||||| |||||| || ||||||||| | | || ||| | ||||| || || | |
Sbjct 27838 TTTCCGTGGTTCTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCGAGG 27779
Query 63342 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63401
|| ||||| | | | ||||| || ||||| || || ||||| | |||| |||||||||
Sbjct 27778 TAGATGGCGAAAGCACCAGGTCGCTTGTTACCACCTTGATCAACATATCGAGCGGTGTTG 27719
Query 63402 TTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAG 63461
|| |||| | | ||| |||| || ||||| || | || || ||||||| || ||
Sbjct 27718 TTGAAAACCCGAAGCATAGGAACGATTCCGTTGGAGTTTCCGTTTGTACCGGCAATGTAA 27659
Query 63462 CTTCCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGA 63519
||| |||| || || | || |||| | || || || ||||| | || || |
Sbjct 27658 GCACCAGTGGCGCGGATTCTGTGAACATTGA--GTCCGATACCACCTGCGTTCTTTGAAA 27601
Query 63520 TTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAA 63579
| | || || || || ||||| |||||||| || ||||| || || |||||| |
Sbjct 27600 TCATGGCACAAATCTTCAAAGTGTCGTAGATACCATCAATGCTGTCCTCCTTCATGTCGA 27541
Query 63580 GTAGAAAACAGCTAGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAA 63638
|| || || ||| | ||| || | | || || ||| ||| | || || ||
Sbjct 27540 TGAGGAAGCATGAAGAAAGTTG-TGCCTGTGGTGTACCAGCAGCAAAAAGTGTTGGTGAG 27482
Query 63639 GCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC 63698
||||| || || | || || | | ||||| || || || || | || ||||||
Sbjct 27481 GCGTGGGTGAAGTACTTGCTGGACATCAAGTTGTAAGTTTCGATGGCAGCCTCAATATCC 27422
Query 63699 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63758
|| ||||| || ||||||||||| | ||| || || || | ||| |||||||
Sbjct 27421 TCGCCGTGTATTCCGACAGCGACACGCATGATCATATGTTGTGGACGTTCGCAGATCTTG 27362
Query 63759 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 63818
| | | | || ||| || | || || |||||||| || | ||| |
Sbjct 27361 CCATCGAGGCGGAGGAGATATGATCGCTCGAGGGTCTTGAAACCAAAGTATTGGTAGTTA 27302
Query 63819 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATC- 63877
|| || || ||||| | || | |||||||| | ||| | || | || |||
Sbjct 27301 AAATCACGGTCGTAGACGATGGCGGAGTTGAGCTCGGCCTCGTGCTTCATGACACAATCG 27242
Query 63878 CATGGTGATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA 63936
||| | | ||| || || || || ||| |||| ||| || ||||| | |
Sbjct 27241 TATGTT--TGTTTGCTGATCATTGGTGACAATTTTTGATTTCGAGGGTTGACATAATGGT 27184
Query 63937 ATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACG 63995
|||| || || || | | | ||| | || || |||| |||||| || || || ||
Sbjct 27183 ATAATTCGGAAATGAC-GCTCGAGAATTGCTTCTTGGTTTGCTTGTGGAGGTTCGAGACT 27125
Query 63996 GCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030
|| ||||| || || || ||||||||||| |||||
Sbjct 27124 GCAATTCTTGCTGCGAGGATGGCATAATCGGGATG 27090
>seq2036
Length=314316
Score = 129 bits (142), Expect = 7e-25
Identities = 295/443 (67%), Gaps = 6/443 (1%)
Strand=Plus/Plus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|||||||| ||| | ||||| || ||||| || || || ||||| | | || || ||
Sbjct 235612 TTTTGGTAATCAGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCGAGAGAGATGTTC 235671
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
|||||||| || || || |||| ||| || |||| || | | || | |||||
Sbjct 235672 TCCATGAAGTCGAATGGGTTGGCAACCTTGTAAACCTTCTCATTGCCGAG---AGAAAGG 235728
Query 33133 AAT---CTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATA 33189
| | ||| ||||| || || || ||| ||||||| | |||||| || | |
Sbjct 235729 AGAAGACGATCGGCGACAAACTCAATGTATTGCTTCATCAGGTTGGCATTCATGCCGAGA 235788
Query 33190 AGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 33249
|| ||||||||| |||| | || ||||| ||||| || || || || ||
Sbjct 235789 AGCGCGCAAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCCTCGGTGATG 235848
Query 33250 ATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCG 33309
| | | || | | | | || || ||||| || || || | | ||||||
Sbjct 235849 ACTGCTTGGACTGCTGCCTTGCTTGGGCGATGCTTCAAGTGGGAGAAGAGAAGGCATGCG 235908
Query 33310 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGC 33369
|| ||| ||| |||||||| || | || | |||||||| || || || || | |
Sbjct 235909 AAGTCGGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAGGTAAGACCAGCC 235968
Query 33370 ATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCT 33429
|| ||||||||||| || | ||| || ||||| ||||| || ||| |||||||| ||
Sbjct 235969 ATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCACTGAAGAAGATACCC 236028
Query 33430 TCTACTGCAGCAAAGGCAATAAG 33452
|| || ||||||||||||| |||
Sbjct 236029 TCAACAGCAGCAAAGGCAACAAG 236051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622927024297560
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