Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq778 93.3 4e-14 >seq778 Length=242110 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || ||||| | || || | || ||||| | Sbjct 99337 ATGCAAATCTTCGTCAAGACTCTTACCGGAAAGACCATCACTTTGGAGGTCGAATCTTCA 99396 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| || || || || || || ||||| ||| Sbjct 99397 GACACAATCGACAATGTGAAGTCTAAGATTCAGGATAAGGAGGGTATCCCACCCGACCAA 99456 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || |||| || |||||||||||| || |||| | ||| | ||||||| |||||| Sbjct 99457 CAGCGCCTCATTTTCGCCGGCAAGCAACTTGAGGATGGCCGAACCCTCAGCGACTATAAC 99516 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || ||||| || ||| |||| || || Sbjct 99517 ATCCAAAAGGAGAGTACTCTTCACTTGGT 99545 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || ||||| || | || || | ||||| ||| | Sbjct 99565 ATGCAGATCTTTGTTAAGACTTTGACTGGCAAGACTATCACATTAGAAGTTGAGTCTTCG 99624 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| |||||| || || || || || || || |||||| Sbjct 99625 GACACGATTGATAATGTCAAGTCAAAGATCCAGGATAAGGAGGGTATTCCACCAGATCAA 99684 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | || |||||||| | || |||| | | | |||||||||| ||| Sbjct 99685 CAGCGATTGATCTTCGCAGGCAAGCAGTTGGAGGATGGTCGTACCCTCAGCGATTACAAC 99744 Query 24171 ATTCAAAAAGA 24181 |||||||| || Sbjct 99745 ATTCAAAAGGA 99755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429922423561605