Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq778 93.3 4e-14
>seq778
Length=242110
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || | || ||||| | || || | || ||||| |
Sbjct 99337 ATGCAAATCTTCGTCAAGACTCTTACCGGAAAGACCATCACTTTGGAGGTCGAATCTTCA 99396
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | || || |||||| || || || || || || ||||| |||
Sbjct 99397 GACACAATCGACAATGTGAAGTCTAAGATTCAGGATAAGGAGGGTATCCCACCCGACCAA 99456
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | || |||| || |||||||||||| || |||| | ||| | ||||||| ||||||
Sbjct 99457 CAGCGCCTCATTTTCGCCGGCAAGCAACTTGAGGATGGCCGAACCCTCAGCGACTATAAC 99516
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199
|| ||||| || ||| |||| || ||
Sbjct 99517 ATCCAAAAGGAGAGTACTCTTCACTTGGT 99545
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || || || ||||| || | || || | ||||| ||| |
Sbjct 99565 ATGCAGATCTTTGTTAAGACTTTGACTGGCAAGACTATCACATTAGAAGTTGAGTCTTCG 99624
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | ||||| |||||| || || || || || || || ||||||
Sbjct 99625 GACACGATTGATAATGTCAAGTCAAAGATCCAGGATAAGGAGGGTATTCCACCAGATCAA 99684
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| || |||| | || |||||||| | || |||| | | | |||||||||| |||
Sbjct 99685 CAGCGATTGATCTTCGCAGGCAAGCAGTTGGAGGATGGTCGTACCCTCAGCGATTACAAC 99744
Query 24171 ATTCAAAAAGA 24181
|||||||| ||
Sbjct 99745 ATTCAAAAGGA 99755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429922423561605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |