Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2371 219 5e-52 seq2036 107 2e-18 >seq2371 Length=131994 Score = 219 bits (242), Expect = 5e-52 Identities = 1167/1841 (63%), Gaps = 41/1841 (2%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| |||||| || ||| ||| ||||| |||||||| || ||||| || | Sbjct 29133 TGAACTGGATGGGTGCCGAGGCAGCCATTGTACGGAGATAGTACATTCCAGTCTTAAGAC 29074 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 || ||||||| | | |||||| || | ||| | |||||| | |||| Sbjct 29073 CCAACTTCCAGCCTGCGAAATGCATACTGGTAATCTTCCCCATGGTTGGATCCTTCATGT 29014 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || |||||| ||| |||||||| ||||| ||||| || || ||||| | || | Sbjct 29013 GGATGTTCATTGATTGAGATTGATCAATGAACGCACCACGGTCGGCAGCCATCTGAACGA 28954 Query 113745 CATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 113802 | | | | ||| ||||||| ||||| |||| ||| ||| |||||| ||||||| Sbjct 28953 --TGGTACGTTGTGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATATCAGCTGGGAT 28896 Query 113803 ATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGA 113862 | | ||||| ||||| ||||| | | || | | ||||| | | || Sbjct 28895 GTTTGGAACGTTTTGAATGGATCCACCGTCAGCAATGATACGGTTTTTCATGTTATCGGA 28836 Query 113863 CCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCA 113920 ||| || || || | ||||||| | || ||| ||||||||| ||||| Sbjct 28835 CCACAGTCCCATATCAACCAGATCCTTGAGAAGCCATGG--ATTGACAACTTGGAACTCT 28778 Query 113921 CCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979 || || || |||| ||| ||||| |||| ||||||||||| |||||||| ||| Sbjct 28777 CCAGCAAGAACACGTCG-AGAGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTGA- 28720 Query 113980 ACCCAAGATTTGGGC-GGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 114038 | |||||| || | | ||| ||| || ||||| || || | ||| | ||||| |||| Sbjct 28719 ATCCAAGAATTTGACTGGTACTGGCAGTTGGCATAGGAGCGACGAGCAAACTGTTGCGGA 28660 Query 114039 GACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT--GTCTC 114096 ||| | || ||| | | ||| | | |||| || | || | | || | Sbjct 28659 TACCATGTTGAGCAATCTGCTGCTTTAAGCTAGCCCAATCCCAAA-GATCCGTAGGTGTA 28601 Query 114097 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTC 114156 | | |||||| ||| | ||||| || | |||||| || || || | | ||||| Sbjct 28600 ACACC-CCACATGTCATATTGGAGCTCGCCCTTGGAGGCAGGTGAGCCTTGGTAAGTCTC 28542 Query 114157 GTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 114216 |||| || | || || ||||| || | || | || ||||| || || || Sbjct 28541 ATATGTACCATGAATCTTTGCCAACTCCATGGAAGCAGTCAAAGCAGCGTGGTAAATGGT 28482 Query 114217 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC-ACA 114275 || || || | || | ||||||||| ||| || || | || || | Sbjct 28481 TTCGAAGATTTGGATGTTGAGGTGCTTGGCCTCTGGGGACTCGAATGGAAGACGAAGAGC 28422 Query 114276 AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 114335 || ||| |||| || |||||||||||||| || |||| || | || | | ||| Sbjct 28421 CAAGAAAG-CATCAGCAAGACCTTGGACACCAAGAGCAATAGGTCTGTGGCGGAAATTGC 28363 Query 114336 ACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 114392 ||||| || ||| ||| || || | || ||||||||| | | || | || | Sbjct 28362 TCTTTCTTGC---CTCGGGCACAGGGTAGTAGTTGATATCGATAATCTTGTTCAAGTTCT 28306 Query 114393 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT 114452 || |||||| | || || |||||||| | | | ||| || || ||||| |||| Sbjct 28305 TGACGACAACTTGGCAGACCTCGTGAAGCTTCTGGAAGTCATAAGTGGCAGTCTTCTCAT 28246 Query 114453 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512 ||||| | || || || | || |||| || || |||| |||||| || Sbjct 28245 CAACATATGTTGGGAGAGCCAGCGATGCCAAGTTGCAAACAGCAACCTCATCAGGTGCAC 28186 Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572 ||| || | |||||| |||||||| || || || ||||| || | |||||||| | Sbjct 28185 AGTATTCGACAATTTCAGTACACAAGTTGGAGCTTCGGATGGTACCAAGATTCTTTTGGT 28126 Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632 | |||| ||| || |||||||||||||||||| | || | || ||||| ||||| | Sbjct 28125 TGCTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCAGTCTCGGTTTGAG 28066 Query 114633 ACTTGAGAATAGCCTTCCAGACATCGGCGGC--TGGCACAGTGGCGTTGGCTCGCCCCTC 114690 || ||| |||| | ||| | | ||| || | | ||| | | ||||| Sbjct 28065 CCTCGAGGATAGAGTACCAAAGCTTTTGGGCCTTGATGCTCTTGCG--GCCCTTGCCCTC 28008 Query 114691 CTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 114750 |||||| || ||| | || || || || ||||| | | || | | || || Sbjct 28007 AGACTCGTATTTCTCGTACAAAGCCTCGAATTCGTCACCGTAGACGTCGGCCAAACCAGG 27948 Query 114751 TGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAG 114810 || || ||||| | | | ||| | | || |||||||||||||||||||| Sbjct 27947 ACACTCATTAGGGCACATCAATGTCCAGTCAAGGTTCTTTTCAACACGCTTCATGAAGAG 27888 Query 114811 GTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 114870 ||||| |||||||| || |||| ||||| || ||| | || || | || || || Sbjct 27887 ATCTGGAATCCAGAGGGCGTAGAAAAGATCACGGGCACGAACCTCCTCCTTTCCGTGGTT 27828 Query 114871 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 114930 || | || | || || | | ||| |||||||| || || ||||| | |||| Sbjct 27827 CTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAA 27768 Query 114931 TGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATAC 114984 | || | | || |||| | || | ||||| | || ||| || || || Sbjct 27767 AGCACC---AGGTCGCTTGTTACCACCTTGATCAACATATCGAGCGGTGTTGTTGAAAAC 27711 Query 114985 GCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATT 115044 |||||||| |||| ||| || | || | || ||||| || ||| || | | Sbjct 27710 CCGAAGCATAGGAACGATTCCGTTGGAGTTTCCGTTTGTACCGGCAATGTAAGCACCAGT 27651 Query 115045 GGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 115104 ||| | || || | | | || ||||| ||||| |||||| || || || Sbjct 27650 GGCGCGGATTCTGTGAACATTGAGTCCGATACCACCTGCGTTCTTTGAAATCATGGCACA 27591 Query 115105 CTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCA 115164 | | | | || ||||||| || || || ||| |||| | |||| |||||||| Sbjct 27590 AATCTTCAAAGTGTCGTAGATACCATCAATGCTGTCCTCCTTCATGTCGATGAGGAAGCA 27531 Query 115165 GCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 || | ||||| | |||||||||||| || || ||||||| |||||| |||| Sbjct 27530 TGAAGAAAGTTGTGCCTGTGGTGTACCAGCAGCAAAAAGTGTTGGTGAGGCGTGGGTGAA 27471 Query 115225 CATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGA 115282 || |||| ||||||| | ||| || || | | | || ||| || || ||||| Sbjct 27470 -GTA-CTTGCTGGACATCAAGTTGTAAGTTTCGATGGCAGCCTCAATATCCTCGCCGTGT 27413 Query 115283 ATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGC 115342 || |||| | ||| ||||| | ||| | ||| || ||| | | |||||||| Sbjct 27412 ATTCCGACAGCGACACGCATGATCATATGTTGTGGACGTTCGCAGATCTTGCCATCGAGG 27353 Query 115343 CTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 | |||| || ||| | |||||||| |||||| || Sbjct 27352 CGGAGGAGATATGATCGCTCGAGGGTCTTGAAACCAAAGTA 27312 >seq2036 Length=314316 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 |||||||||||| ||||||||||| | || || |||||| || || | |||||| || Sbjct 235917 GTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAGGTAAGACCAGCCATGAGGCC 235976 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 ||||||||||||||||| || | || ||||| ||||||||| ||||| ||| Sbjct 235977 ACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCACTGAAGAAGATACCCTCAACAGC 236036 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 || || |||| ||||| | |||||||| Sbjct 236037 AGCAAAGGCAACAAGACGTTGAGCAAAGG 236065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597334253210280