Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq2371 219 5e-52
seq2036 107 2e-18
>seq2371
Length=131994
Score = 219 bits (242), Expect = 5e-52
Identities = 1167/1841 (63%), Gaps = 41/1841 (2%)
Strand=Plus/Minus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||| |||||| || ||| ||| ||||| |||||||| || ||||| || |
Sbjct 29133 TGAACTGGATGGGTGCCGAGGCAGCCATTGTACGGAGATAGTACATTCCAGTCTTAAGAC 29074
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
|| ||||||| | | |||||| || | ||| | |||||| | ||||
Sbjct 29073 CCAACTTCCAGCCTGCGAAATGCATACTGGTAATCTTCCCCATGGTTGGATCCTTCATGT 29014
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
|| |||||| ||| |||||||| ||||| ||||| || || ||||| | || |
Sbjct 29013 GGATGTTCATTGATTGAGATTGATCAATGAACGCACCACGGTCGGCAGCCATCTGAACGA 28954
Query 113745 CATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 113802
| | | | ||| ||||||| ||||| |||| ||| ||| |||||| |||||||
Sbjct 28953 --TGGTACGTTGTGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATATCAGCTGGGAT 28896
Query 113803 ATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGA 113862
| | ||||| ||||| ||||| | | || | | ||||| | | ||
Sbjct 28895 GTTTGGAACGTTTTGAATGGATCCACCGTCAGCAATGATACGGTTTTTCATGTTATCGGA 28836
Query 113863 CCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCA 113920
||| || || || | ||||||| | || ||| ||||||||| |||||
Sbjct 28835 CCACAGTCCCATATCAACCAGATCCTTGAGAAGCCATGG--ATTGACAACTTGGAACTCT 28778
Query 113921 CCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979
|| || || |||| ||| ||||| |||| ||||||||||| |||||||| |||
Sbjct 28777 CCAGCAAGAACACGTCG-AGAGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTGA- 28720
Query 113980 ACCCAAGATTTGGGC-GGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 114038
| |||||| || | | ||| ||| || ||||| || || | ||| | ||||| ||||
Sbjct 28719 ATCCAAGAATTTGACTGGTACTGGCAGTTGGCATAGGAGCGACGAGCAAACTGTTGCGGA 28660
Query 114039 GACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT--GTCTC 114096
||| | || ||| | | ||| | | |||| || | || | | || |
Sbjct 28659 TACCATGTTGAGCAATCTGCTGCTTTAAGCTAGCCCAATCCCAAA-GATCCGTAGGTGTA 28601
Query 114097 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTC 114156
| | |||||| ||| | ||||| || | |||||| || || || | | |||||
Sbjct 28600 ACACC-CCACATGTCATATTGGAGCTCGCCCTTGGAGGCAGGTGAGCCTTGGTAAGTCTC 28542
Query 114157 GTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 114216
|||| || | || || ||||| || | || | || ||||| || || ||
Sbjct 28541 ATATGTACCATGAATCTTTGCCAACTCCATGGAAGCAGTCAAAGCAGCGTGGTAAATGGT 28482
Query 114217 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGC-ACA 114275
|| || || | || | ||||||||| ||| || || | || || |
Sbjct 28481 TTCGAAGATTTGGATGTTGAGGTGCTTGGCCTCTGGGGACTCGAATGGAAGACGAAGAGC 28422
Query 114276 AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 114335
|| ||| |||| || |||||||||||||| || |||| || | || | | |||
Sbjct 28421 CAAGAAAG-CATCAGCAAGACCTTGGACACCAAGAGCAATAGGTCTGTGGCGGAAATTGC 28363
Query 114336 ACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 114392
||||| || ||| ||| || || | || ||||||||| | | || | || |
Sbjct 28362 TCTTTCTTGC---CTCGGGCACAGGGTAGTAGTTGATATCGATAATCTTGTTCAAGTTCT 28306
Query 114393 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT 114452
|| |||||| | || || |||||||| | | | ||| || || ||||| ||||
Sbjct 28305 TGACGACAACTTGGCAGACCTCGTGAAGCTTCTGGAAGTCATAAGTGGCAGTCTTCTCAT 28246
Query 114453 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512
||||| | || || || | || |||| || || |||| |||||| ||
Sbjct 28245 CAACATATGTTGGGAGAGCCAGCGATGCCAAGTTGCAAACAGCAACCTCATCAGGTGCAC 28186
Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572
||| || | |||||| |||||||| || || || ||||| || | |||||||| |
Sbjct 28185 AGTATTCGACAATTTCAGTACACAAGTTGGAGCTTCGGATGGTACCAAGATTCTTTTGGT 28126
Query 114573 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 114632
| |||| ||| || |||||||||||||||||| | || | || ||||| ||||| |
Sbjct 28125 TGCTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCAGTCTCGGTTTGAG 28066
Query 114633 ACTTGAGAATAGCCTTCCAGACATCGGCGGC--TGGCACAGTGGCGTTGGCTCGCCCCTC 114690
|| ||| |||| | ||| | | ||| || | | ||| | | |||||
Sbjct 28065 CCTCGAGGATAGAGTACCAAAGCTTTTGGGCCTTGATGCTCTTGCG--GCCCTTGCCCTC 28008
Query 114691 CTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 114750
|||||| || ||| | || || || || ||||| | | || | | || ||
Sbjct 28007 AGACTCGTATTTCTCGTACAAAGCCTCGAATTCGTCACCGTAGACGTCGGCCAAACCAGG 27948
Query 114751 TGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAG 114810
|| || ||||| | | | ||| | | || ||||||||||||||||||||
Sbjct 27947 ACACTCATTAGGGCACATCAATGTCCAGTCAAGGTTCTTTTCAACACGCTTCATGAAGAG 27888
Query 114811 GTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 114870
||||| |||||||| || |||| ||||| || ||| | || || | || || ||
Sbjct 27887 ATCTGGAATCCAGAGGGCGTAGAAAAGATCACGGGCACGAACCTCCTCCTTTCCGTGGTT 27828
Query 114871 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 114930
|| | || | || || | | ||| |||||||| || || ||||| | ||||
Sbjct 27827 CTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAA 27768
Query 114931 TGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATAC 114984
| || | | || |||| | || | ||||| | || ||| || || ||
Sbjct 27767 AGCACC---AGGTCGCTTGTTACCACCTTGATCAACATATCGAGCGGTGTTGTTGAAAAC 27711
Query 114985 GCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATT 115044
|||||||| |||| ||| || | || | || ||||| || ||| || | |
Sbjct 27710 CCGAAGCATAGGAACGATTCCGTTGGAGTTTCCGTTTGTACCGGCAATGTAAGCACCAGT 27651
Query 115045 GGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 115104
||| | || || | | | || ||||| ||||| |||||| || || ||
Sbjct 27650 GGCGCGGATTCTGTGAACATTGAGTCCGATACCACCTGCGTTCTTTGAAATCATGGCACA 27591
Query 115105 CTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCA 115164
| | | | || ||||||| || || || ||| |||| | |||| ||||||||
Sbjct 27590 AATCTTCAAAGTGTCGTAGATACCATCAATGCTGTCCTCCTTCATGTCGATGAGGAAGCA 27531
Query 115165 GCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224
|| | ||||| | |||||||||||| || || ||||||| |||||| ||||
Sbjct 27530 TGAAGAAAGTTGTGCCTGTGGTGTACCAGCAGCAAAAAGTGTTGGTGAGGCGTGGGTGAA 27471
Query 115225 CATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGA 115282
|| |||| ||||||| | ||| || || | | | || ||| || || |||||
Sbjct 27470 -GTA-CTTGCTGGACATCAAGTTGTAAGTTTCGATGGCAGCCTCAATATCCTCGCCGTGT 27413
Query 115283 ATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGC 115342
|| |||| | ||| ||||| | ||| | ||| || ||| | | ||||||||
Sbjct 27412 ATTCCGACAGCGACACGCATGATCATATGTTGTGGACGTTCGCAGATCTTGCCATCGAGG 27353
Query 115343 CTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383
| |||| || ||| | |||||||| |||||| ||
Sbjct 27352 CGGAGGAGATATGATCGCTCGAGGGTCTTGAAACCAAAGTA 27312
>seq2036
Length=314316
Score = 107 bits (118), Expect = 2e-18
Identities = 113/149 (76%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
|||||||||||| ||||||||||| | || || |||||| || || | |||||| ||
Sbjct 235917 GTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAGGTAAGACCAGCCATGAGGCC 235976
Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177
||||||||||||||||| || | || ||||| ||||||||| ||||| |||
Sbjct 235977 ACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCACTGAAGAAGATACCCTCAACAGC 236036
Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGG 126206
|| || |||| ||||| | ||||||||
Sbjct 236037 AGCAAAGGCAACAAGACGTTGAGCAAAGG 236065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597334253210280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |