Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq778 91.5 1e-13
>seq778
Length=242110
Score = 91.5 bits (100), Expect = 1e-13
Identities = 135/186 (73%), Gaps = 8/186 (4%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA--GTCCTCGAGTTGTTTACCGG 138478
|| ||||| || || ||||| ||| | ||| |||| |||||| || || || || |
Sbjct 99302 GATTCCTTCTGGATATTGTAATCGG--AAAGTGTGCGACCGTCCTCAAGCTGCTTGCCAG 99245
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538
| |||| || ||||||||||| || || ||||| || ||||| ||| | || | |||
Sbjct 99244 CAAAGATAAGGCGCTGTTGGTCTGGTGGGATACCCTCCTTGTCC-TGAATCTTCGATTTG 99186
Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596
| |||| | | ||| |||| ||||||||||||| || | || |||||||||| |||
Sbjct 99185 ACGTTGT-CGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCTTACCAGTCAAAGT 99127
Query 138597 TTTTAC 138602
|| ||
Sbjct 99126 CTTGAC 99121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496246327301520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |