Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq778 91.5 1e-13 >seq778 Length=242110 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/186 (73%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA--GTCCTCGAGTTGTTTACCGG 138478 || ||||| || || ||||| ||| | ||| |||| |||||| || || || || | Sbjct 99302 GATTCCTTCTGGATATTGTAATCGG--AAAGTGTGCGACCGTCCTCAAGCTGCTTGCCAG 99245 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || ||||||||||| || || ||||| || ||||| ||| | || | ||| Sbjct 99244 CAAAGATAAGGCGCTGTTGGTCTGGTGGGATACCCTCCTTGTCC-TGAATCTTCGATTTG 99186 Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | |||| | | ||| |||| ||||||||||||| || | || |||||||||| ||| Sbjct 99185 ACGTTGT-CGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCTTACCAGTCAAAGT 99127 Query 138597 TTTTAC 138602 || || Sbjct 99126 CTTGAC 99121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496246327301520