Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq778 87.8 2e-12 >seq778 Length=242110 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||||||||| ||||| ||||||| |||| ||| || | ||| || || ||| | Sbjct 99527 TCCTTTTGGATGTTATAGTCGCTGAGGGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAA 99468 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 || | || || ||||| || || || || || ||||| ||||| || || | Sbjct 99467 ATGAGGCGCTGTTGGTCGGGTGGGATACCCTCCTTATCCTGAATCTTAGACTTCACATTG 99408 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | ||||| ||||| ||||| || | ||| | || || ||||| ||||| || || Sbjct 99407 TCGATTGTGTCTGAAGATTCGACCTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTGACG 99348 Query 45330 AAAATTTGCAT 45340 || |||||||| Sbjct 99347 AAGATTTGCAT 99337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451988560746360