Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq623 100 1e-15 seq1113 87.8 7e-12 >seq623 Length=95226 Score = 100 bits (110), Expect = 1e-15 Identities = 194/284 (68%), Gaps = 2/284 (1%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 ||||| || ||||| || || || ||||| || ||||| ||||| || || ||||| Sbjct 32057 GCAGTCATCACTGTCCCAGCCTACTTCAACGACAACCAACGTCAAGCCACCAAGGATGCG 32116 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || ||||| ||| | || ||||| ||||| || || || || || || |||||| | Sbjct 32117 GGTGCCATTGCCGGTCTTAACGTTCTCCGAATCATCAACGAGCCCACTGCCGCTGCTATC 32176 Query 451442 GCATATGGACTAGGAAAATCAAAAGA-AACAGAAGaaaaaaaTATTTTAGTATTTGATTT 451500 ||||| || || || ||| |||| | || |||| |||| | | ||| | Sbjct 32177 GCATACGGTCTCGGTGCCGGAAAGTCCAACA-AGGAGCGAAATGTTTTGATTTACGATCT 32235 Query 451501 TGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAA 451560 |||||||||||| ||| |||| | ||| || | | ||| || || || || Sbjct 32236 CGGTGGAGGAACTTTCGATGTTTCTCTCCTTAACATCCAGGGTGGTGTTTTCACCGTCAA 32295 Query 451561 GGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 ||| || ||||||||| ||| | |||||| ||||| |||||| Sbjct 32296 GGCCACTGCTGGTGATACCCATTTGGGAGGTCAAGATTTTGATA 32339 >seq1113 Length=83002 Score = 87.8 bits (96), Expect = 7e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118 ||||| || || || || ||||| || || || || || || ||||| || | || Sbjct 57185 TTCGTCAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAATCTAGCGACACTATC 57126 Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178 || | | || || || || || ||||| |||||||| || || ||||| ||||| Sbjct 57125 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCGGACCAACAGCGTTTG 57066 Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAG 391238 || ||| | || || ||||||||||||||| | ||| || | |||||||| || | ||| Sbjct 57065 ATCTTCGCTGGAAAGCAACTTGAAGATGGACGCACTCTGTCAGATTATAACATCCAAAAG 57006 Query 391239 G 391239 | Sbjct 57005 G 57005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975652811705828