Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq623 100 1e-15
seq1113 87.8 7e-12
>seq623
Length=95226
Score = 100 bits (110), Expect = 1e-15
Identities = 194/284 (68%), Gaps = 2/284 (1%)
Strand=Plus/Plus
Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381
||||| || ||||| || || || ||||| || ||||| ||||| || || |||||
Sbjct 32057 GCAGTCATCACTGTCCCAGCCTACTTCAACGACAACCAACGTCAAGCCACCAAGGATGCG 32116
Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441
|| ||||| ||| | || ||||| ||||| || || || || || || |||||| |
Sbjct 32117 GGTGCCATTGCCGGTCTTAACGTTCTCCGAATCATCAACGAGCCCACTGCCGCTGCTATC 32176
Query 451442 GCATATGGACTAGGAAAATCAAAAGA-AACAGAAGaaaaaaaTATTTTAGTATTTGATTT 451500
||||| || || || ||| |||| | || |||| |||| | | ||| |
Sbjct 32177 GCATACGGTCTCGGTGCCGGAAAGTCCAACA-AGGAGCGAAATGTTTTGATTTACGATCT 32235
Query 451501 TGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAA 451560
|||||||||||| ||| |||| | ||| || | | ||| || || || ||
Sbjct 32236 CGGTGGAGGAACTTTCGATGTTTCTCTCCTTAACATCCAGGGTGGTGTTTTCACCGTCAA 32295
Query 451561 GGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604
||| || ||||||||| ||| | |||||| ||||| ||||||
Sbjct 32296 GGCCACTGCTGGTGATACCCATTTGGGAGGTCAAGATTTTGATA 32339
>seq1113
Length=83002
Score = 87.8 bits (96), Expect = 7e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118
||||| || || || || ||||| || || || || || || ||||| || | ||
Sbjct 57185 TTCGTCAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAATCTAGCGACACTATC 57126
Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178
|| | | || || || || || ||||| |||||||| || || ||||| |||||
Sbjct 57125 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCGGACCAACAGCGTTTG 57066
Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAG 391238
|| ||| | || || ||||||||||||||| | ||| || | |||||||| || | |||
Sbjct 57065 ATCTTCGCTGGAAAGCAACTTGAAGATGGACGCACTCTGTCAGATTATAACATCCAAAAG 57006
Query 391239 G 391239
|
Sbjct 57005 G 57005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975652811705828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |