Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq491 149 5e-30
seq1401 113 3e-19
seq634 96.9 3e-14
>seq491
Length=100261
Score = 149 bits (164), Expect = 5e-30
Identities = 914/1452 (63%), Gaps = 21/1452 (1%)
Strand=Plus/Plus
Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333
|| || ||||| || | ||| || ||||| |||||||| ||||| || | | ||||||
Sbjct 73849 ATTCCGTTGGCGTCAACATCGAAGGTGACCTCAATTTGTGGGACACCACGTGGTGCAGGT 73908
Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393
||||| || | | ||| | |||| | || || || || ||| || || |||
Sbjct 73909 GGGATACCAGTGAGCTCGAATTTACCCAAAAGGTTGTTGTCCTTGGTGCGTTGACGCTCA 73968
Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453
|||||||| | ||||||| || ||| ||| || || || | || | || || |
Sbjct 73969 CCCTCGAAGACTTGGATAAGCACACCAGGTTGGTTGTCAGAGAAGGTGGAGAAGACCTCG 74028
Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513
|| || || || || || |||||||| |||| |||||||| |||||| ||
Sbjct 74029 GACTTCTTGGTTGGGATGGTGGTGTTTCTTGGGATAAGCTTGGTCATTTGACCACCAGCA 74088
Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 517571
|| || | |||||| || | || | |||||| | |||| || | || | | ||
Sbjct 74089 GTCTCGATACCAAGGGACAATGGCGCGACATCGAGGAGGAGGATCTCGTTGGTGGACTTG 74148
Query 517572 CATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630
| | || | || ||||| || || || | |||||||| ||||||||||| |||
Sbjct 74149 GAAGAGGTGTCTCCGGAGAGAATGGCAGCCTGGACGGCAGCACCGTATGCAACAGCCTCA 74208
Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAG---TTGT 517687
||||| || | | | ||| | | || || ||||| ||| | || || |||
Sbjct 74209 TCAGGGTTGATGGACTTGTTTGGCTCCTTTCCGTTGAAGTAATCGGTAATGAGCTTTTGG 74268
Query 517688 CTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 517747
|| ||| || ||||||| || ||||| || | || || || || |||| |||||
Sbjct 74269 ATT--CTT-GGGATACGAGTGGAACCTCCGACAAGGACGATCTCGTGAACCTTGGATTTG 74325
Query 517748 TCCAGTTTTGAATCCAATAAAACTTTTTCAAC-GGGTTCAAGACCCGCTCTAAACAAGTC 517806
|| | || | ||| | || || || ||| | | | || || | ||
Sbjct 74326 TCAATCTTGGCATCTGCGAGGACACGGTCGACTGGGGTGGTG-GTGGATCGGAAGAGATC 74384
Query 517807 TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCG 517864
|| || || |||||| | || | ||| || || | || || || || || |||
Sbjct 74385 CTGGCAGAGCTCCTCGAATCTGGCACGAGT--GATGGAGGTGTAGAAGTCGATACCCTCG 74442
Query 517865 AACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGT 517924
|| | ||| |||| ||| || | |||||| | || || || || | || ||||| ||
Sbjct 74443 AAGAGAGAGTCAATTTCGATGGAAGTTTGTGCAGAGGAGGAAAGGGTTCGCTTAGCTCGC 74502
Query 517925 TCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA--TCTGTTTTAT 517982
|| ||||| || | || | || | || || ||| | ||| || | || |
Sbjct 74503 TCGCATGCAGTGCGGAGACGACGAAGAGCACGGGC--GTTGGTAGAAAGGTCCTTCTTGT 74560
Query 517983 ATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTC 518042
|| | ||||| || || | | ||||| | || || ||||| ||||| |
Sbjct 74561 GCTTGCGTTTGAACTCGGAGACGAAGTGGTTAACAAGTCTGTTGTCGAAATCCTCACCAC 74620
Query 518043 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAA 518102
|||| | ||||| |||| || | | |||| || | || || || | | ||| |
Sbjct 74621 CCAAGTGAGTATCACCTGCGGTGGACTTGACTTCAAAGATACCCTCCTCGATGGTCAAGA 74680
Query 518103 GAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTT 518162
| | ||||| ||||| ||||| | |||||| || || || || || ||
Sbjct 74681 GTGAGACATCGAAAGTTCCTCCACCAAGATCAAAGATGAGAACGTTTCGCTCACCCTCAA 74740
Query 518163 GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 518222
|| || || ||||| || |||| || || || || || || || || || | | |
Sbjct 74741 CCTTCTTGTCGAGACCGTAAGCAATGGCGGCTGCGGTAGGCTCGTTGATGATACGGAGGA 74800
Query 518223 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 518282
| || |||||||| || || ||||| || |||||||| | |||||||||| | || |
Sbjct 74801 CGTTGAGACCAGCGATCAGACCGGCATCCTTGGTGGCTTGACGTTGTGAATCGGTGAAGT 74860
Query 518283 ATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTT 518342
| || || || || | ||||| | | || | ||||| || || || || |
Sbjct 74861 AGGCTGGGACTGTGACGACGGCGTTGTTGACGGTTCCACCAAGGTAGGCCTCGGCAGTCT 74920
Query 518343 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTC-A 518401
| |||| || || ||||| || || |||| |||||| | ||||||| ||
Sbjct 74921 CTCTCATCTTGACCAAGATCATGGAAGAGATTTCTTCTGGTGTGAATTGCTTCTTCTCGC 74980
Query 518402 TTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAG 518461
|||| | | | || | ||| || |||| | | || | || || ||
Sbjct 74981 CCTTGAACTCA-ATCTCGACGACTGGCTTTCCACCACGGTCGAGGACGGTGAAAGGGAAG 75039
Query 518462 TATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCA 518521
| |||||||| | || || ||||| || | || ||||| || || |||||
Sbjct 75040 TGCTTCATATCAGCCTGCACCTCCTGGTCTGCGAACTTTCGTCCAATCAAACGCTTTGCG 75099
Query 518522 TCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGA 518581
|| || | || |||| || || || || |||| | || || |||||||| ||||||
Sbjct 75100 TCGAAGACTGTGTTGGCGGGGTTCATGGCGACTTGGTTCTTTGCGGCATCTCCGATCAGA 75159
Query 518582 TGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCA 518641
| || || ||||| || | ||| | || || || || || || || || || || ||
Sbjct 75160 CGCTCGGTATCTGTGAAGGCAACGAAGGAAGGGGTAGTTCGGTTTCCCTGGTCGTTTGCG 75219
Query 518642 ATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCA 518701
||||| |||| | | ||| | | | ||||||||| | || ||||| | |||
Sbjct 75220 ATAATCTCAATTCGATCATCACGGTAAATACCTACACAGGAGTAGGTGGTTCCAAGATCG 75279
Query 518702 ATACCAATAGCA 518713
||||| || |||
Sbjct 75280 ATACCTATGGCA 75291
>seq1401
Length=76520
Score = 113 bits (124), Expect = 3e-19
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227
|| ||||||||||| |||| |||||||||||||| || || | | ||||| ||| |||
Sbjct 32087 TTCTCAAGACCATAGGCAAGGGCAGCAGCAGTTGGCTCGTTGACTACTCTCAGAACGTTA 32146
Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287
||||| |||||| || ||||| || |||||||| | |||||||||||| || || ||
Sbjct 32147 AGACCGGCAATTTGACCAGCATCCTTGGTGGCTTGACGTTGTGAATCGTTGAAGTAAGCT 32206
Query 518288 GGAACAGTAATAACGGC 518304
|| || || | ||| ||
Sbjct 32207 GGGACTGTGACAACAGC 32223
>seq634
Length=94567
Score = 96.9 bits (106), Expect = 3e-14
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 671660 GAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAACT 671719
|| ||||||||||| | ||||| |||||||||||| | ||| |||| ||| | || |||
Sbjct 30562 GAGTTTTTCTTCCACGCCATGGCCGGTCGTGAAGGTCTCATTGATACTGCTGTAAAGACT 30621
Query 671720 GCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGCTCGAAGATATCAAACAAGAA 671779
||||| ||||||||||| ||| | ||||| || ||||||||| ||| ||
Sbjct 30622 GCTGAAACTGGTTATATCCAACGTCGTCTTGTCAAGGCACTCGAAGATGTCATTGCCAAA 30681
Query 671780 TATGATGGTACAGTAAGAAAT 671800
||||| || ||||| |||||
Sbjct 30682 TATGACGGAACAGTCCGAAAT 30702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780693826045246
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |