Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq491 455 4e-123 seq2371 114 2e-20 seq1401 102 1e-16 >seq491 Length=100261 Score = 455 bits (504), Expect = 4e-123 Identities = 1062/1597 (66%), Gaps = 25/1597 (2%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| ||| | || ||||| || || || | ||| |||||||| || || || Sbjct 73714 TCATCCTCAGCCTTGTACTTCTCGGCCTCAGCCAACATGCGCTCAATGTCCTCCTTGGAC 73773 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 || | ||||| || || || || |||||| | ||| || || | |||| || | Sbjct 73774 AAACGTCCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTTCCGGTTCCCTTCTCGAGA 73833 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| || |||| || || || || ||||||||||| | || | ||||||||| | Sbjct 73834 GCAGAGACGTTCATGATTCCGTTGGCGTCAACATCGAAGGTGACCTCAATTTGTGGGACA 73893 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | ||||| | ||| ||||| || | || ||| |||| | | |||| ||| | Sbjct 73894 CCACGTGGTGCAGGTGGGATACCAGTGAGCTCGAATTTACCCAAAAGGTTGTTGTCCTTG 73953 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | ||| ||||| || |||||| || ||| ||||||| || || Sbjct 73954 GTGCGTTGACGCTCACCCTCGAAGACTTGGATAAGCACACCAGGTTGGTTGTCAGAGAAG 74013 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | ||| || || || ||||| || |||| | |||| Sbjct 74014 GTGGAGAAGACCTCGGACTTCTTGGTTGGGATGGTGGTGTTTCTTGGGATAAGCTTGGTC 74073 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA-- 6986 || |||||| ||| |||| ||||| |||| || | || || | ||| | | Sbjct 74074 ATTTGACCACCAGCAGTCTCGATACCAAGGGACAATGGCGCGACATCGAGGAGGAGGATC 74133 Query 6987 --------GGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGT 7038 || |||| | ||| || | || | | ||||| || ||||| | Sbjct 74134 TCGTTGGTGGACTTGGA-AGAGGTGT------CTCCGGAGAGAATGGCAGCCTGGACGGC 74186 Query 7039 CGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAA 7098 || |||||||| || |||||||| ||||| || | || || | || || ||||| || Sbjct 74187 AGCACCGTATGCAACAGCCTCATCAGGGTTGATGGACTTGTTTGGCTCCTTTCCGTTGAA 74246 Query 7099 ATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGAT 7158 ||||| | | | | ||| ||| | ||||| || || || || ||||| | ||||| Sbjct 74247 GTAATCGGTAATGAGCTTTTGGATTCTTGGGATACGAGTGGAACCTCCGACAAGGACGAT 74306 Query 7159 TTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT 7218 || | || || ||||| || ||||| | ||| || ||||| || | Sbjct 74307 CTCGTGAACCTTGGATTTGTCAATCTTGGCATCTGCGAGGACACGGTCGACTGGGGTGGT 74366 Query 7219 ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATA 7278 ||||| | ||| || || ||||| || | ||||| || ||||| || || Sbjct 74367 GGTGGATCGGAAGAGATCCTGGCAGAGCTCCTCGAATCTGGCACGAGTGATGGAGGTGTA 74426 Query 7279 GAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAA 7338 ||| || | || ||| | | || |||||||| |||| |||||||| | || || | Sbjct 74427 GAAGTCGATACCCTCGAAGAGAGAGTCAATTTCGATGGAAGTTTGTGCAGAGGAGGAAAG 74486 Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398 |||||||| || ||||| || || || || | ||||||||| ||||| | ||| || Sbjct 74487 GGTTCGCTTAGCTCGCTCGCATGCAGTGCGGAGACGACGAAGAGCACGGGCGTTGGTAGA 74546 Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTCTTCAGA-GAAGTGTCGAAGGAGTCTCGAAT 7457 || || ||||| || || ||||| ||||| ||| |||||| || ||||| | Sbjct 74547 AAGGTCCTTCTTGTGCTTGCGTTTGAACTCGG-AGACGAAGTGGTTAACAAGTCTGTTGT 74605 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 ||||||| |||||||||||||| ||||| || ||||| | ||||||||||||||||| Sbjct 74606 CGAAATCCTCACCACCCAAGTGAGTATCACCTGCGGTGGACTTGACTTCAAAGATACCCT 74665 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | || ||| | || | || ||||| || || || ||||| || ||||| ||||| |||| Sbjct 74666 CCTCGATGGTCAAGAGTGAGACATCGAAAGTTCCTCCACCAAGATCAAAGATGAGAACGT 74725 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | || | || ||||| ||||||||||| || || || || || || || || | Sbjct 74726 TTCGCTCACCCTCAACCTTCTTGTCGAGACCGTAAGCAATGGCGGCTGCGGTAGGCTCGT 74785 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | || ||||| || ||| || ||||| || | ||||| || || ||||| |||| Sbjct 74786 TGATGATACGGAGGACGTTGAGACCAGCGATCAGACCGGCATCCTTGGTGGCTTGACGTT 74845 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | |||||| | |||||||| ||||| || ||||| |||| |||| | ||| || | Sbjct 74846 GTGAATCGGTGAAGTAGGCTGGGACTGTGACGACGGCGTTGTTGACGGTTCCACCAAGGT 74905 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 | | || || | ||| |||| ||| | | ||| || || || ||||| | | | Sbjct 74906 AGGCCTCGGCAGTCTCTCTCATCTTGACCAAGATCATGGAAGAGATTTCTTCTGGTGTGA 74965 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 | || ||| | || || || || |||| || | | || || || || ||| | || Sbjct 74966 ATTGCTTCTTCTCGCCCTTGAACTCAATCTCGACGACTGGCTT-TC--CACCACGGTCGA 75022 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 || | | | | | |||||||| | || |||| ||||| | ||||||| || Sbjct 75023 GGACGGTGAAAGGGAAGTGCTTCATATCAGCCTGCACCTCCTGGTCTGCGAACTTTCGTC 75082 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 | || | ||||||||| || || |||||||| |||||||||||| ||||||||| | Sbjct 75083 CAATCAAACGCTTTGCGTCGAAGACTGTGTTGGCGGGGTTCATGGCGACTTGGTTCTTTG 75142 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | || || ||||| ||||| || || || || || || ||| | || ||||| |||| Sbjct 75143 CGGCATCTCCGATCAGACGCTCGGTA---TCTGTGAAGGCAACGAAGGAAGGGGTAGTTC 75199 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 | || || |||||||| || ||||| || | || || | | | | || || || | Sbjct 75200 GGTTTCCCTGGTCGTTTGCGATAATCTCAATTCGATCATCACGGTAAATACCTACACAGG 75259 Query 8118 AATACGTTGTTCCTAAATCAATACCGATTGCTTGAGT 8154 | || || ||||| | ||| ||||| || || |||| Sbjct 75260 AGTAGGTGGTTCCAAGATCGATACCTATGGCAGGAGT 75296 >seq2371 Length=131994 Score = 114 bits (126), Expect = 2e-20 Identities = 404/626 (65%), Gaps = 15/626 (2%) Strand=Plus/Minus Query 105454 CCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGA 105513 || ||||| |||||||||||||| | | | || || || | |||||| ||||| | | | Sbjct 28012 CCCTCAGACTCGTATTTCTCGTACAAAGCCTCGAATTCGTCACCGTAGACGTCGGCCAAA 27953 Query 105514 CCCTTTGCCTGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATG 105573 || || || ||| || | ||||| ||| | | | |||||| || |||||| Sbjct 27952 CCAGGACACTCATTAGGGCACATCAATGTCCAGTCAAGGTTCTTTTCAACACGCTTCATG 27893 Query 105574 AACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCT 105633 || | |||||||||||| | ||| | || || || || | |||| || | || Sbjct 27892 AAGAGATCTGGAATCCAGAGGGCGTAGAAAAGATCACGGGCACGAACCTCCTCCTTTCCG 27833 Query 105634 TGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACT 105693 || ||| || | ||||| || |||| || ||||||||||||||| || | |||| Sbjct 27832 TGGTTCTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCGAGGTAGATG 27773 Query 105694 GCAATAGACCCTTTACGACGC------CCCGCTTGATTGACATATCTTGCGGTTGAGTTA 105747 || | || || | | ||| || |||||| ||||||| ||||| ||| Sbjct 27772 GCGAAAGCACC---AGGTCGCTTGTTACCACCTTGATCAACATATCGAGCGGTGTTGTTG 27716 Query 105748 TACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGAT 105807 | || || | ||| |||| || || | ||| |||| ||||| || ||| | | Sbjct 27715 AAAACCCGAAGCATAGGAACGATTCCGTTGGAGTTTCCGTTTGTACCGGCAATGTAAGCA 27656 Query 105808 TTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGC 105867 | | || || | |||||| | | || ||||| || || ||| || Sbjct 27655 CCAGTGGCGCGGATTCTGTGAACATTGAGTCCGATACCACCTGCGTTCTTTGAAATCATG 27596 Query 105868 GCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGG 105927 ||||| || | || ||||| ||||| || || || || ||||| | | || ||| Sbjct 27595 GCACAAATCTTCAAAGTGTCGTAGATACCATCAATGCTGTCCTCCTTCATGTCGATGAGG 27536 Query 105928 AAACACGATGACATTTGTGGTCTG-GGTGTACCAGCATTGAACAGAGTTGGTGTTGCATG 105986 || || || || | |||| | ||| |||||||||||| || || ||||||| || || Sbjct 27535 AAGCATGAAGAAAGTTGT-GCCTGTGGTGTACCAGCAGCAAAAAGTGTTGGTGAGGCGTG 27477 Query 105987 AATGAACAAACCTT--TCGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGT 106044 |||| | ||| | || | | | ||| ||||| | | | |||||||| | Sbjct 27476 GGTGAAGTA--CTTGCTGGACATCAAGTTGTAAGTTTCGATGGCAGCCTCAATATCCTCG 27419 Query 106045 CCATGAATACCAATAGCGACGCGCAT 106070 || || || || | |||||| ||||| Sbjct 27418 CCGTGTATTCCGACAGCGACACGCAT 27393 >seq1401 Length=76520 Score = 102 bits (112), Expect = 1e-16 Identities = 235/341 (69%), Gaps = 16/341 (5%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||||||||| ||||| || ||| | |||||||| || | ||| Sbjct 31951 ATCGAAATCTTCACCACCCAAGTGGGTATCTCCGTTGGTGGACTTGACTTCGAATACACC 32010 Query 7516 TCCTTCAATGTTTAACAAC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 | | || | || ||| || | ||| || || || || ||||| || | || | Sbjct 32011 TTTCTGGAT-CTCAAGAACAGAGATATCGAAGGTTCCTCCGCCCAGATCGTA---GACTG 32066 Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || | ||| | ||| | | ||| || ||||| || || | || || || ||||| | Sbjct 32067 CGAT--GATC-TTGTCCTCATCCTTCTCAAGACCATAGGCAAGGGCAGCAGCAGTTGGCT 32123 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTG 7692 | || | | | ||| ||| || || ||||| ||| | ||||| || || ||||| Sbjct 32124 CGTTGACTACTCTCAGAACGTTAAGACCGGCAAT--TTGACCAGCATCCTTGGTGGCTTG 32181 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTT-TCTTAC 7751 ||||| |||||||| ||||| || ||||| || || || |||| | ||| || ||| Sbjct 32182 ACGTTGTGAATCGTTGAAGTAAGCTGGGACTGTGACAACAGCGTTC-TGAATTGGCTTTG 32240 Query 7752 CGAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAAC 7791 |||||| | || || | || ||||| ||| || ||||| Sbjct 32241 TGAGATATGCCTCAGCAGTCTCCTTCATCTTTTGT-AGAAC 32280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635112229636440