Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq1798 100 3e-16
>seq1798
Length=66087
Score = 100 bits (110), Expect = 3e-16
Identities = 164/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTA-GACAGATATG 154930
|| |||||||| ||||||||||| |||||| ||||| | | | | | | | | ||
Sbjct 19690 ATCATGATTACTTACCCATCTACCTTTGGTGTCTTTGAGCCCGAAGTCAAGGCTGTT-TG 19748
Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990
|| | ||||| | |||| || || || || | ||||| || ||| | ||||| ||
Sbjct 19749 CGAGTTGGTTCACCAACATGGAGGACAAGTTTACATGGATGGTGCTAATATGAATGCTCA 19808
Query 154991 GGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAA 155050
| ||| | ||| ||||| ||| || ||||| || ||||| ||| | || ||
Sbjct 19809 AATCGGATTGTGCTCACCTGGTGAGATTGGGGCTGATGTTTGCCATCTCAACCTTCACAA 19868
Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
|||||||||||||| || || ||||| ||||| || || ||||| || |||||
Sbjct 19869 GACATTCTGTATTCCTCACGGCGGTGGTGGTCCAGGTGTTGGTCCAATTGGTGT 19922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579194040745440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |