Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1798 100 3e-16 >seq1798 Length=66087 Score = 100 bits (110), Expect = 3e-16 Identities = 164/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTA-GACAGATATG 154930 || |||||||| ||||||||||| |||||| ||||| | | | | | | | | || Sbjct 19690 ATCATGATTACTTACCCATCTACCTTTGGTGTCTTTGAGCCCGAAGTCAAGGCTGTT-TG 19748 Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990 || | ||||| | |||| || || || || | ||||| || ||| | ||||| || Sbjct 19749 CGAGTTGGTTCACCAACATGGAGGACAAGTTTACATGGATGGTGCTAATATGAATGCTCA 19808 Query 154991 GGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAA 155050 | ||| | ||| ||||| ||| || ||||| || ||||| ||| | || || Sbjct 19809 AATCGGATTGTGCTCACCTGGTGAGATTGGGGCTGATGTTTGCCATCTCAACCTTCACAA 19868 Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||||||||||||| || || ||||| ||||| || || ||||| || ||||| Sbjct 19869 GACATTCTGTATTCCTCACGGCGGTGGTGGTCCAGGTGTTGGTCCAATTGGTGT 19922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579194040745440