Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq2036 84.2 2e-11
>seq2036
Length=314316
Score = 84.2 bits (92), Expect = 2e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 18997 ATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATA 19056
||||| || || || || || | ||||| ||| || || | || || |||||||| ||
Sbjct 235939 ATCAACTCGTTGGAGAAGGTAAGACCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATG 235998
Query 19057 GAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCT 19116
|| || || || ||| ||||| ||||| || || || ||||| ||||| || | ||
Sbjct 235999 GATGCGAAAGAACCACTGAAGAAGATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGA 236058
Query 19117 CCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTT 19172
|| | ||| || || | || |||||| | ||||||||||||||||| ||
Sbjct 236059 GCAAAGGTAGACTCCTTGTCTTGGATCCATCGGACAGCCCAATCAGCCTTCTTCTT 236114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562090594701240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |