Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq2036 84.2 2e-11 >seq2036 Length=314316 Score = 84.2 bits (92), Expect = 2e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 18997 ATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATA 19056 ||||| || || || || || | ||||| ||| || || | || || |||||||| || Sbjct 235939 ATCAACTCGTTGGAGAAGGTAAGACCAGCCATGAGGCCACGCTTCTTCAACCAGAAGATG 235998 Query 19057 GAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCT 19116 || || || || ||| ||||| ||||| || || || ||||| ||||| || | || Sbjct 235999 GATGCGAAAGAACCACTGAAGAAGATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGA 236058 Query 19117 CCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTT 19172 || | ||| || || | || |||||| | ||||||||||||||||| || Sbjct 236059 GCAAAGGTAGACTCCTTGTCTTGGATCCATCGGACAGCCCAATCAGCCTTCTTCTT 236114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562090594701240