Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq2371 87.8 9e-13
>seq2371
Length=131994
Score = 87.8 bits (96), Expect = 9e-13
Identities = 161/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981
||||| || ||| || | |||||||||||| | || || || | ||| | || |
Sbjct 27907 TCAACACGCTTCATGAAGAGATCTGGAATCCAGAGGGCGTAGAAAAGATCACGGGCACGA 27848
Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041
| || || |||||||| |||||| || || | ||| || |||| ||| | |||||||
Sbjct 27847 ACCTCCTCCTTTCCGTGGTTCTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCAT 27788
Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101
|| || | ||||| || ||| ||| || || ||||||||||| || ||||
Sbjct 27787 GGCTCGAGGTAGATGGCGAAAGCACCAGGTCGCTTGTTACCACCTTGATCAACATATCGA 27728
Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGT 26157
|| || | |||||||| | ||| ||||| | ||| | || |||||||||
Sbjct 27727 GCGGTGTTGTTGAAAACCCGAAGCATAGGAACGATTCCGTTGGAGTTTCCGTTTGT 27672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253032009550325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |