Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq1798 138 1e-27
>seq1798
Length=66087
Score = 138 bits (152), Expect = 1e-27
Identities = 199/281 (71%), Gaps = 0/281 (0%)
Strand=Plus/Minus
Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319
|| || |||| || |||||| | |||||||| || ||| ||||| |||| ||| |||
Sbjct 18770 AGACCCTCTGGGCCGTGATATACAGCATAGAAAGCACTCATGTTTGCAAGCAATGCCTGT 18711
Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379
|||||||| | || ||||| || || ||||||| ||||| ||||||| |||||| |||
Sbjct 18710 GCTGTGCACACATTGCTGGTAGCCTTTTCTCTTCGGATATGTTGCTCTCGAGTTTGAAGT 18651
Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439
|| ||||| ||| || || |||||| ||| || | | | || ||
Sbjct 18650 GCCAATCTCATTGCCTTATCTCCAAGTCTGTCCTTTGAAACTCCGATGAGGCGTCCTGGG 18591
Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499
|| || | |||||| || || | |||||||| ||||||||||| || ||||||||
Sbjct 18590 ATTTTACGCTTATATTTATCGCTAACGGCAAAGAAAGCAGCATGAGGCCCACCGTATCCA 18531
Query 139500 ATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540
| ||||| |||||| | ||| | |||| | ||||| ||
Sbjct 18530 AAAGGAACACCAAATCGTTGGGCATTACCAAATGCAATGTC 18490
Score = 95.1 bits (104), Expect = 1e-14
Identities = 163/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||||||| ||||| || || ||||| ||||| || || ||||||||||||||||| ||
Sbjct 19922 ACACCAATTGGACCAACACCTGGACCACCACCGCCGTGAGGAATACAGAATGTCTTGTGA 19863
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| || ||||| || ||||| || ||| |||| ||| | || | || |||
Sbjct 19862 AGGTTGAGATGGCAAACATCAGCCCCAATCTCACCAGGTGAGCACAATCCGATTTGAGCA 19803
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | ||| |||||||| | || || || || |||| | ||||| | || || | |
Sbjct 19802 TTCATATTAGCACCATCCATGTAAACTTGTCCTCCATGTTGGTGAACCAACTCGCA-AAC 19744
Query 138363 TGTC-TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415
| | ||| | | ||||| |||||| || ||||| || |||||||| ||
Sbjct 19743 AGCCTTGACTTCGGGCTCAAAGACACCAAAGGTAGATGGGTAAGTAATCATGAT 19690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578979647689320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |