Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq2371 280 2e-70
seq1 116 4e-21
seq2036 96.9 4e-15
>seq2371
Length=131994
Score = 280 bits (310), Expect = 2e-70
Identities = 1178/1825 (65%), Gaps = 55/1825 (3%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204
||||||||| |||| ||||| ||| || | ||||| | || |||||||||| ||
Sbjct 27312 TACTTTGGTTTCAAGACCCTCGAGC-GATCATATCTCCTCCGCCTCGATGGCAAGATCTG 27370
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
||| ||||| | ||| ||||||| ||||| |||| || ||||| || || |||||
Sbjct 27371 CGAACGTCCACAACATATGATCATGCGTGTCGCTGTCGGAATACACGGCGAGGATATTGA 27430
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 75322
||| | | || || ||| || ||||||| |||| || |||| ||||| |||||
Sbjct 27431 GGCTGCCATCGAAACTTACAACTTGATGTCCAGCAAG-TAC-TTCACCCACGCCTCACCA 27488
Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382
|| || || ||||||||||||| | || | || |||||||| |||| ||
Sbjct 27489 ACACTTTTTGCTGCTGGTACACCACAGGCACAACTTTCTTCATGCTTCCTCATCGACATG 27548
Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442
||||||||| || | |||||||| | ||| | | | ||||| || ||||||
Sbjct 27549 AAGGAGGACAGCATTGATGGTATCTACGACACTTTGAAGATTTGTGCCATGATTTCAAAG 27608
Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502
|| || ||||| || | | | || | | |||| | || |||
Sbjct 27609 AACGCAGGTGGTATCGGACTCAATGTTCACAGAATCCGCGCCACTGGTGCTTACATTGCC 27668
Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562
|| ||||| || | || | || || |||| |||||||| || || ||| ||| ||
Sbjct 27669 GGTACAAACGGAAACTCCAACGGAATCGTTCCTATGCTTCGGGTTTTCAACAACACCGCT 27728
Query 75563 CGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCAT-CGCGGTCTACTTGGAA 75616
|| ||||| |||||| || | |||| | || | | ||| ||||| | ||
Sbjct 27729 CGATATGTTGATCAAGGTGG---TAACAAGCGACCTGGTGCTTTCGCCATCTACCTCGAG 27785
Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676
|||||||| |||||| | | |||||||| || | ||| ||||| || | || |||
Sbjct 27786 CCATGGCACGCCGATGTTTTCGAGTTCCTCGACCTCCGAAAGAACCACGGAAAGGAGGAG 27845
Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736
| ||| | ||||| || | |||| ||||||||||| || ||||||||||| |||
Sbjct 27846 GTTCGTGCCCGTGATCTTTTCTACGCCCTCTGGATTCCAGATCTCTTCATGAAGCGTGTT 27905
Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796
|| || | | ||| | | | || || | || || ||| | ||||||
Sbjct 27906 GAAAAGAACCTTGACTGGACATTGATGTGCCCTAATGAGTGTCCTGGTTTGGCCGACGTC 27965
Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA-GAGCCAATGC 75855
||||| || || || || | ||| || || || ||||| | | ||| ||
Sbjct 27966 TACGGTGACGAATTCGAGGCTTTGTACGAGAAATACGAGTCTGAGGGCAAGGGCC---GC 28022
Query 75856 GACTGTACCA--GCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913
| | | || ||| | ||||| | |||| ||| | | || || |||||||||
Sbjct 28023 AAGAGCATCAAGGCCCAAAAGCTTTGGTACTCTATCCTCGAGGCTCAAACCGAGACTGGA 28082
Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973
| || | |||||||||||||||||||| ||| ||||| |||||||||||| | ||
Sbjct 28083 AACCCTTTCATGCTTTACAAGGATGCTTGCAACCGAAAGAGCAACCAAAAGAATCTTGGT 28142
Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033
|| ||| ||||| || | || || |||||| | || ||| | ||||||
Sbjct 28143 ACCATCCGAAGCTCCAACTTGTGTACTGAAATTGTCGAATACTGTGCACCTGATGAGGTT 28202
Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACT 76093
||||||||||| |||||||| | || || |||| ||||| |||| ||||| ||||
Sbjct 28203 GCTGTTTGCAACTTGGCATCGCTGGCTCTCCCAACATATGTTGATGAGAAGACTGCCACT 28262
Query 76094 TTTGATTATGAAAAACTTCATGAAATC-ACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152
| ||| | | || ||||| || || | ||| |||| ||| || | ||| |
Sbjct 28263 TATGACTTCCAGAAGCTTCACGAGGTCTGCCAAG-TTGTCGTCAAGAACTTGAACAAGAT 28321
Query 76153 CATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209
|| || | || | || || || ||| || ||||| ||| | || |||||
Sbjct 28322 TATCGATATCAACTACTACCCTGTGCCCGAG---GCAAGAAAGAGCAATTTCCGCCACAG 28378
Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT--TTGTGCCGCTACGCA 76267
|||||||| | | ||||| |||||||| || |||| ||| || | | | || | ||
Sbjct 28379 ACCTATTGCTCTTGGTGTCCAAGGTCTTGCTGATG-CTTTCTTGGCTCTTCGTCTTC-CA 28436
Query 76268 TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCA 76327
|| || || || |||||| | | || | ||||| |||||||| || |||||
Sbjct 28437 TTCGAGTCCCCAGAGGCCAAGCACCTCAACATCCAAATCTTCGAAACCATTTACCACGCT 28496
Query 76328 TCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGT 76387
| || || || ||||| | || ||| | |||||||| | | ||
Sbjct 28497 GCTTTGACTGCTTCCATGGAGTTGGCAAAGATTCATGGTACATATGAGACTTACCAAGGC 28556
Query 76388 TCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCA 76445
|| || || ||| | || | ||| || | ||| ||||||| || | ||| | | ||
Sbjct 28557 TCACCTGCCTCCAAGGGCGAGCTCCAATATGACATGTGGG-GTGTTACACCTACGGATC- 28614
Query 76446 ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505
| || |||| | | ||| | | || | | ||| | || |||||| |
Sbjct 28615 TTTGGGATTGGGCTAGCTTAAAGCAGCAGATTGCTCAACATGGTATCCGCAACAGTTTGC 28674
Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTT 76564
| | || || |||||||| ||| ||| |||| |||||| | || || |||||
Sbjct 28675 TCGTCGCTCCTATGCCAACTGCCAGTACCAGTCAAATTCTTGGAT-TCAACGAGTGCTTC 28733
Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624
|| |||||||| | ||||||||| || | || || || ||||| |||||
Sbjct 28734 GAGCCATACACCTCCAACATCTACTCTCGACGTGTTCTTGCTGGAGAGTTCCAAGTTGTC 28793
Query 76625 AA-CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGA 76683
|| | | | || |||| || || | || || || |||||| | | ||||| |
Sbjct 28794 AATCCATGGCTTC-TCAAGGATCTGGTTGATATGGGACTGTGGTCCGATAACATGAAAAA 28852
Query 76684 ---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATA 76739
| ||| || ||| ||||| ||||||||||| | || | ||||||| |||||
Sbjct 28853 CCGTATCATTGCTGA----CGGTGGATCCATTCAAAACGTTCCAAACATCCCAGCTGATA 28908
Query 76740 TCAAGAATCTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAGATGTCATTGACATGGC 76797
||||| || ||| || || ||||||| ||| | | | | || || | |||||
Sbjct 28909 TCAAGGCCCTTTACAAGACTGTTTGGGAAATCTCACAACGTACCA--TCGTTCAGATGGC 28966
Query 76798 CGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCC 76857
|| || |||||| |||||||||||| |||| ||||| | |||| | |||
Sbjct 28967 TGCCGACCGTGGTGCGTTCATTGATCAATCTCAATCAATGAACATCCACATGAAGGATCC 29026
Query 76858 AACGATGTCCAAGCTCTCTTCTATGCATAT-GTACGCGTGGAAACAGGGGCTCAAAACCG 76916
||| ||| ||| | | ||||||| | | | || ||||| ||| || || || |
Sbjct 29027 AACCATGGGGAAGATTACCAGTATGCATTTCGCAGGC-TGGAAGTTGGGTCTTAAGACTG 29085
Query 76917 GAATGTACTATCTCCGATCAAAGGC 76941
|||||||||||||||| ||| |||
Sbjct 29086 GAATGTACTATCTCCGTACAATGGC 29110
>seq1
Length=509191
Score = 116 bits (128), Expect = 4e-21
Identities = 227/329 (69%), Gaps = 10/329 (3%)
Strand=Plus/Plus
Query 175186 TTCAGTGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATT-GTGGATTT 175244
|||| ||||||| ||| || |||| ||||| |||| | | | | ||| || |||
Sbjct 194381 TTCAAGGATGTTGCGGGTATGGACGAAGCCAA-GATGGAGATTATGGAATTCGTTTCTTT 194439
Query 175245 TCTCAAGCAACCCGAGAGATATTTTGGAAGT---GGTGCCAAGATCCCCCGAGGCGCCCT 175301
|| ||| ||| ||| || | | ||| ||||| |||||||| ||||| ||| |
Sbjct 194440 CCTAAAGACACCGGAGCAAT---TCGAAAGATTGGGTGCTAAGATCCCTCGAGGAGCCAT 194496
Query 175302 TCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATC 175361
|| | || || ||||| || ||||| | || || |||| || || |||||
Sbjct 194497 CCTTTCTGGGCCACCCGGTACTGGTAAGACTTTACTAGCAAAGGCCACAGCTGGAGAATC 194556
Query 175362 AAATGTCCCATTCATCCAGTG-CTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGG 175420
| ||| || ||| || |||| | || | | ||||||||||||||||||||||| |
Sbjct 194557 AGGTGTGCCTTTCTTC-AGTGTCAGTGGTTCCGAGTTTGTGGAGATGTTTGTTGGTGTTG 194615
Query 175421 GTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCT 175480
|||| || ||||| |||||||| | || ||| | | ||| || |||||| |||
Sbjct 194616 GTGCTTCCAGAGTTCGAGATCTCTTCGCTATGGCCAGAAAGAATACCCCTTGTATTATCT 194675
Query 175481 TCATTGATGAGATTGATGCGGTGGGCAAG 175509
|||||||||| || |||||| | || |||
Sbjct 194676 TCATTGATGAAATCGATGCGATTGGAAAG 194704
>seq2036
Length=314316
Score = 96.9 bits (106), Expect = 4e-15
Identities = 151/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAA--AGTCT 65064
|| || || ||| |||||||||| | ||||| | |||| | | |||| |||||
Sbjct 236126 GTTCCTTGCATTAAGAAGAAGGCTGATTGGGCTGTCCGATGGATCCAAGACAAGGAGTCT 236067
Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGG 65124
|||| || | || ||| |||| ||||| ||| ||||||||||||||| ||
Sbjct 236066 A---CCTTTGCTCAACGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGT 236010
Query 65125 TCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCA 65184
|| ||| | || | |||||||||||||| || |||||| | || || ||||||
Sbjct 236009 TCTTTCGCATCCATCTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCC 235950
Query 65185 AATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217
|| || | || ||||| |||||||||||||||
Sbjct 235949 AACGAGTTGATCTCCCGTGATGAGGGTCTCCAC 235917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596550278602080
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