Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq778 84.2 3e-11 >seq778 Length=242110 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || |||||||| || ||||| ||||||||||| || ||| Sbjct 99565 ATGCAGATCTTTGTTAAGACTTTGACTGGCAAGACTATCACATTAGAAGTTGAGTCTTCG 99624 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || || || || ||||| || || || || ||||| ||| Sbjct 99625 GACACGATTGATAATGTCAAGTCAAAGATCCAGGATAAGGAGGGTATTCCACCAGATCAA 99684 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || ||||||| | || || |||||| | || ||| Sbjct 99685 CAGCGATTGATCTTCGCAGGCAAGCAGTTGGAGGAT 99720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731848296495600