Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq778 125 6e-24
>seq778
Length=242110
Score = 125 bits (138), Expect = 6e-24
Identities = 168/234 (72%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 29553 TCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATA 29612
|| ||||||||| | | ||| ||||||| || | ||| || ||||||||||| ||
Sbjct 99798 TCATTGTCCTCCACGAAGACGAAGCACCAGGTGCAAAGTGCTCTCCTTTTGAATGTTGTA 99739
Query 29613 ATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATC 29672
||| | ||| ||| ||| || | || ||||| || | ||||||| || |||||
Sbjct 99738 ATCGCTGAGGGTACGACCATCCTCCAACTGCTTGCCTGCGAAGATCAATCGCTGTTGATC 99679
Query 29673 CGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAG 29732
|| ||||||||||| || || || | ||| |||||| | || | ||||| |||
Sbjct 99678 TGGTGGAATACCCTCCTTATCCTGGATCTTTGACTTGACATTATCAATCGTGTCCGAAGA 99619
Query 29733 TTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| | || ||||| |||||||| || || |||||||| ||||||||
Sbjct 99618 CTCAACTTCTAATGTGATAGTCTTGCCAGTCAAAGTCTTAACAAAGATCTGCAT 99565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385207035620331
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |