Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq778 102 8e-17
>seq778
Length=242110
Score = 102 bits (112), Expect = 8e-17
Identities = 137/188 (73%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| || ||||| |||||||||||| | ||| ||| |||||| |||||||||||
Sbjct 99305 GTGGATTCCTTCTGGATATTGTAATCGGAAAGTGTGCGACC-GTCCTCAAGCTGCTTGCC 99247
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || ||||| ||||| || ||||| || |||||||| ||||| ||
Sbjct 99246 AGCAAAGATAAGGCGCTGTTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTCGATTT 99187
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | || |||| | |||||| |||| ||||| ||| || || |||| |||
Sbjct 99186 GACGTTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCTTACCAGTCAAAGT 99127
Query 133643 TTTTACGA 133650
|| ||||
Sbjct 99126 CTTGACGA 99119
Score = 86.0 bits (94), Expect = 6e-12
Identities = 125/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||||||| | ||| | | | |||||||||||||| ||
Sbjct 99021 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCA-TCCTCGAGCTGCTTTCC 98963
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || || || ||||| || || ||||| |||||||| ||||| |||
Sbjct 98962 GGCAAAGATAAGGCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGCTCTT 98903
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|| | || | ||||| | | |||||| |||| ||||| ||| || |||||
Sbjct 98902 GACGTTGTCGATAGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTACCGGT 98849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483405143208840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |