Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq778 104 6e-17
seq2481 84.2 5e-11
>seq778
Length=242110
Score = 104 bits (114), Expect = 6e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 206192 TCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGC 206251
|||| || || || ||||| | || ||||| ||| ||||| |||| || |||
Sbjct 98847 TCACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACTATCGACAACGTCAAGA 98906
Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311
|||||||| || || || || ||| || ||| ||| | |||||||| |||||||
Sbjct 98907 GCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAACGCCTTATCTTTGCCGGAA 98966
Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371
||||| | || ||||| | || | ||||||||||| ||||||| ||||| ||||| |
Sbjct 98967 AGCAGCTCGAGGATGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCGACTCTCC 99026
Query 206372 ACCTTGT 206378
|||| ||
Sbjct 99027 ACCTCGT 99033
>seq2481
Length=279592
Score = 84.2 bits (92), Expect = 5e-11
Identities = 166/244 (68%), Gaps = 4/244 (2%)
Strand=Plus/Plus
Query 101537 TCAGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGAAACGAAGG 101596
||||| ||||| |||| |||||||| | ||| |||| | | | |||||||||||
Sbjct 39600 TCAGCAACCTTTCGGACATAATTGTGTCGCTTTTCCTCACGAAGACGTGCGAAACGAAGG 39659
Query 101597 GCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGACGTCAAAATTATGAAGAATT 101656
||||||||||| || | ||||| ||||| || | | ||| || || || | ||
Sbjct 39660 GCAGATTGTCCACCACGACCGTGCTTCTTGGGGAGATCGACTGAGAATTTGTGGACAACA 39719
Query 101657 TTCTTGGTGTTCCCAGAGAGAGTCGCGAAAAGAGCAGAAGAACCGTCAAGAATAATAAAT 101716
| |||||| ||| ||| || ||||||| || ||| || | ||||||||||
Sbjct 39720 TCGCGGGTGTTTCCACTGAGGGTTCCGAAAAGCGCTCCGTTACCATCCATAATAATAAAT 39779
Query 101717 CCGAATACATCGGA--AGATGTCAGAAGTTCAGAGAGACACTCGATATGGAATGAACTGT 101774
|| ||| || || ||| || || |||| |||| ||| |||||||| |||
Sbjct 39780 CCAAAT--TTCTGATCAGACTCCAAGAGCTCAGCGAGAGCCTCTGTATGGAATTTGTTGT 39837
Query 101775 CGCA 101778
||||
Sbjct 39838 CGCA 39841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181781566873311
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |