Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq2036 87.8 2e-12
>seq2036
Length=314316
Score = 87.8 bits (96), Expect = 2e-12
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771
|||||| || || | || || || |||||| ||||||||| || || || |||||
Sbjct 236336 GCTCGAGGAGGTTCTCATTGACAATTCCGTCGGAGGCAGCGAAGAAAGCAAGGACGTGGG 236395
Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831
| ||| | ||||| | ||||| || || ||||||||||| | | || ||||| |
Sbjct 236396 AGATGAAGTAGCGTTCGTCATCGTTGAGCTTGTTGTTCCAGTCGTGGAGATCTTTGGAAA 236455
Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891
|| ||||||||| | ||||| | || | | |||||||||||| ||||| ||||
Sbjct 236456 GATCAATCTCTTCGGCAGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCC--AGAT 236513
Query 110892 CT 110893
||
Sbjct 236514 CT 236515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445079984505120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |