Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2036 87.8 2e-12 >seq2036 Length=314316 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || || | || || || |||||| ||||||||| || || || ||||| Sbjct 236336 GCTCGAGGAGGTTCTCATTGACAATTCCGTCGGAGGCAGCGAAGAAAGCAAGGACGTGGG 236395 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||| | ||||| | ||||| || || ||||||||||| | | || ||||| | Sbjct 236396 AGATGAAGTAGCGTTCGTCATCGTTGAGCTTGTTGTTCCAGTCGTGGAGATCTTTGGAAA 236455 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 || ||||||||| | ||||| | || | | |||||||||||| ||||| |||| Sbjct 236456 GATCAATCTCTTCGGCAGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCC--AGAT 236513 Query 110892 CT 110893 || Sbjct 236514 CT 236515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445079984505120