Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq2036 89.7 2e-12
>seq2036
Length=314316
Score = 89.7 bits (98), Expect = 2e-12
Identities = 117/161 (73%), Gaps = 1/161 (1%)
Strand=Plus/Minus
Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768
|| || || || ||||||| || || || | || || || || |||| || |||||
Sbjct 236054 CGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTT-CTTTCGCATCCAT 235996
Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828
|||||||||||| |||||||| || ||| ||||| ||||| ||||| |||||
Sbjct 235995 CTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAGTTGATCTC 235936
Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
|| || |||||| | || ||||||||| || |||||||
Sbjct 235935 CCGTGATGAGGGTCTCCACACCGACTTCGCATGCCTTCTCT 235895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588283271711995
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |