Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2036 89.7 2e-12 >seq2036 Length=314316 Score = 89.7 bits (98), Expect = 2e-12 Identities = 117/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768 || || || || ||||||| || || || | || || || || |||| || ||||| Sbjct 236054 CGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTT-CTTTCGCATCCAT 235996 Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828 |||||||||||| |||||||| || ||| ||||| ||||| ||||| ||||| Sbjct 235995 CTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCAACGAGTTGATCTC 235936 Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 || || |||||| | || ||||||||| || ||||||| Sbjct 235935 CCGTGATGAGGGTCTCCACACCGACTTCGCATGCCTTCTCT 235895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588283271711995