Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2371 327 2e-84 >seq2371 Length=131994 Score = 327 bits (362), Expect = 2e-84 Identities = 1332/2068 (64%), Gaps = 46/2068 (2%) Strand=Plus/Minus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| |||||||| ||||| | || || | ||||||| ||||||||||| ||||| | Sbjct 29139 CAACTGTGAACTGGATGGGTGCCGAGGCAGCCATTGTACGGAGATAGTACATTCCAGTCT 29080 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | ||||||| |||| || ||||||||| || || | || | ||||| Sbjct 29079 TAAGACCCAACTTCCAGCCTGCGAAATGCATACTGGTAATCTTCCCCATGGTTGGATCCT 29020 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 || || || ||||| || ||| |||||| ||||| || || | || || ||||| | Sbjct 29019 TCATGTGGATGTTCATTGATTGAGATTGATCAATGAACGCACCACGGTCGGCAGCCATCT 28960 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 | ||||| ||| | |||||||||| ||| ||| ||| ||||||||| ||| Sbjct 28959 GAACGATGGTACGTTGTGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATATCAGCTG 28900 Query 75612 GAAGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 | | |||| | |||||||||||||| || |||| || || || || || | || Sbjct 28899 GGATGTTTGGAACGTTTTGAATGGATCCACCGTCAGCAATGATACGGTTTTTCATGTTAT 28840 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 | ||||| | | || | | | | || || ||||| |||| ||| || | Sbjct 28839 CGGACCACAGTCCCATATCAACCAGATCCTTGAGAAGCCATGGATTGACAACTTGGAACT 28780 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 |||||| | || | ||||| ||| || || ||| ||||| || | | || ||| Sbjct 28779 CTCCAGCAAGAACACGTCGAGAGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTGA 28720 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848 ||| | ||||||| || ||||| |||||||| || || | ||||| || | || Sbjct 28719 ATCCAAGAATTTGACTGGTACTGGCAGTTGGCATAGGAGCGACGAGCAAACTGTTGCGGA 28660 Query 75849 GACCATGTGTTCTGATTTTAT-CTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACA 75907 ||||||| || | | |||| || || ||||||||||||||| | ||| | Sbjct 28659 TACCATGTTGAGCAATCTGCTGCTTTAAGCTAGC-CCAATCCCAAAGATCCGTAGGTGTA 28601 Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCG 75967 ||| |||| | || ||||| || || ||| ||| ||| || | || || || Sbjct 28600 ACACCCCACATGTCATATTGGAGCTCGCCCTTGGAGGCAGGTGAGCCTTGGTAAGTCTCA 28541 Query 75968 TAAGTCCCGTCCTTTTCAGCTAGTTC---GCAACTCGCCTCTAACGCACCGTAATAAATT 76024 || || || | | | || | || | || | | || ||| ||| ||||| Sbjct 28540 TATGTACCATGAATCTTTGCCAACTCCATGGAAGCAGTC---AAAGCAGCGTGGTAAATG 28484 Query 76025 GTTTCGAAAATCTTCTTATTAAGAT-CTTGCGCTTCAAGACTATCAAAAGGATAATGTAA 76083 |||||||| || | | || || | |||| || || | || || ||| | | || Sbjct 28483 GTTTCGAAGATTTGGATGTTGAGGTGCTTG-GCCTCTGGGGACTCGAATGGAAGACG-AA 28426 Query 76084 AAG--AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 76141 || || ||| ||||| || || || || || |||| | |||||||||| || | | Sbjct 28425 GAGCCAAGAAA-GCATCAGCAAGACCTTGGACACCAAGAGCAATAGGTCTGTGGCGGAAA 28367 Query 76142 TTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT 76201 ||| || || || || | |||||| || || ||||| ||||| || || | || Sbjct 28366 TTGCTCTTTCTTGCCTCGGGCACAGGGTAGTAGTTGATATCGATAATCTTGTTCAAGTTC 28307 Query 76202 CTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCA-TCTA-TCA 76259 |||| || |||| || || | || || | || ||| | | || ||| ||| Sbjct 28306 TTGACGACAACTTGGCAGACCTCGTGAAGCTTCTGGAAGTCATAAGTGGCAGTCTTCTCA 28247 Query 76260 CAAACATATTA----AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTG 76315 ||||||| ||||| | ||||| | || ||||| || ||||||| || | Sbjct 28246 TCAACATATGTTGGGAGAGCCAGCGATGCCAAGTTGCAAACAGCAACCTCATCAGG-TGC 28188 Query 76316 GCA-TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTG 76374 || |||| | || || || || | || | ||| || |||||||| | ||| Sbjct 28187 ACAGTATTCGACAATTTCAGTACACAAGTTGGAGCTTCGGATGGTACCAAGATTCTTTTG 28128 Query 76375 GTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTG 76434 |||||||||| ||| || | ||||| ||||| | || || ||||||| || | || Sbjct 28127 GTTGCTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCAGTCTCGGTTTG 28068 Query 76435 TGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTT--- 76491 | |||| ||||| | ||| | | || || || | ||| | ||| Sbjct 28067 AGCCTCGAGGATAGAGTACCAAAGCTTTTGGGCCTTGATGCTC---TTGCGGCCCTTGCC 28011 Query 76492 CTCTCTTTCATATTGT--GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAA 76549 ||| || |||| ||| | | || || ||||| || || | || || ||||| Sbjct 28010 CTCAGACTCGTATTTCTCGTACAAAGCC--TCGAATTCGTCACCGTAGACGTCGGCCAAA 27953 Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT--AACCCGTTTCA 76607 |||||||| ||||| || |||||||||| ||| ||| | ||| || ||| || |||| Sbjct 27952 CCAGGACACTCATTAGGGCACATCAATGTCCAGTCA--AGGTTCTTTTCAACACGCTTCA 27895 Query 76608 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTC 76667 | |||||||| || ||||| || || || ||||| |||| | | || || |||| Sbjct 27894 TGAAGAGATCTGGAATCCAGAGGGCGTAGAAAAGATCACGGGCACGAACCTCCTCCTTTC 27835 Query 76668 CTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 76727 | |||||| || || |||||||| | || ||| | |||||||| || || || | Sbjct 27834 CGTGGTTCTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCGAGGTAGA 27775 Query 76728 TCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTAT 76787 | || | | |||| ||||| || ||||| || ||||| | ||||| || ||||| || Sbjct 27774 TGGCGAAAGCACCAGGTCGCTTGTTACCACCTTGATCAACATATCGAGCGGTGTTGTTGA 27715 Query 76788 AAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTC 76847 |||| | | ||| |||| || ||||| || | || ||||| || | ||| ||| | Sbjct 27714 AAACCCGAAGCATAGGAACGATTCCGTTGGAGTTTCCGTTTGTACCGGCAATGTAAGCAC 27655 Query 76848 CACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAG 76907 || || || || | || | || || || || ||||| | || || || | | Sbjct 27654 CAGTGGCGCGGATTCTGTGAACATTGAGTCCGATACCACCTGCGTTCTTTGAAATCATGG 27595 Query 76908 CACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAA 76967 |||| ||||| ||||| ||||| || || || || || ||| |||||| | || | Sbjct 27594 CACAAATCTTCAAAGTGTCGTAGATACCATCAATGCTGTCCTCCTTCATGTCGATGAGGA 27535 Query 76968 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAG 77027 | || ||| | ||| || || || ||| ||| | ||| || || || || | Sbjct 27534 AGCATGAAGAAAGTTGTGCCTGTGGTGTACCAGCAGCAAAAAGTGTTGGTGAGGCGTGGG 27475 Query 77028 TGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGAT 77087 |||| | || || | | ||||| ||||| || | || || |||||| | Sbjct 27474 TGAAGTACTTGCTGGACATCAAGTTGTAAGTTTCGATGGCAGCCTCAATATCCTCGCCGT 27415 Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAG-TCTTATTATTT 77146 | ||||| |||||||||||||| | |||||| || || ||||| ||| |||| || Sbjct 27414 GTATTCCGACAGCGACACGCATGATCATATGTTGTGGACGTTC-GCAGATCTTGCCATCG 27356 Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 77206 | | | |||||| || | || || |||||||| || | ||| ||| || Sbjct 27355 AGGCGGAGGAGATATGATCGCTCGAGGGTCTTGAAACCAAAGTATTGGTAGTTAAAATCA 27296 Query 77207 CTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATC-CATGAC 77265 | ||||| | || | || || || | | ||| | || | ||| ||| ||| Sbjct 27295 CGGTCGTAGACGATGGCGGAGTTGAGCTCGGCCTCGTGCTTCATGACACAATCGTATGTT 27236 Query 77266 AGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTC 77325 || | || ||||| || | || |||| ||| || ||||| | |||| || Sbjct 27235 TGT-TTGCTGATCATTGGTGACAATTTTTGATTTCGAGGGTTGACATAATGGTATAATTC 27177 Query 77326 TTCCATTACG-TCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTC 77384 || ||| ||| ||| | || || |||| |||||| || ||||| || || |||| Sbjct 27176 GGAAATGACGCTCG-AGAATTGCTTCTTGGTTTGCTTGTGGAGGTTCGAGACTGCAATTC 27118 Query 77385 TAGCAGCTAGAATTGCATAGTCAGGATG 77412 | || || || || ||||| || ||||| Sbjct 27117 TTGCTGCGAGGATGGCATAATCGGGATG 27090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712911309837120