Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq2371 327 2e-84
>seq2371
Length=131994
Score = 327 bits (362), Expect = 2e-84
Identities = 1332/2068 (64%), Gaps = 46/2068 (2%)
Strand=Plus/Minus
Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431
|||| |||||||| ||||| | || || | ||||||| ||||||||||| ||||| |
Sbjct 29139 CAACTGTGAACTGGATGGGTGCCGAGGCAGCCATTGTACGGAGATAGTACATTCCAGTCT 29080
Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491
| ||||||| |||| || ||||||||| || || | || | |||||
Sbjct 29079 TAAGACCCAACTTCCAGCCTGCGAAATGCATACTGGTAATCTTCCCCATGGTTGGATCCT 29020
Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551
|| || || ||||| || ||| |||||| ||||| || || | || || ||||| |
Sbjct 29019 TCATGTGGATGTTCATTGATTGAGATTGATCAATGAACGCACCACGGTCGGCAGCCATCT 28960
Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611
| ||||| ||| | |||||||||| ||| ||| ||| ||||||||| |||
Sbjct 28959 GAACGATGGTACGTTGTGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATATCAGCTG 28900
Query 75612 GAAGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668
| | |||| | |||||||||||||| || |||| || || || || || | ||
Sbjct 28899 GGATGTTTGGAACGTTTTGAATGGATCCACCGTCAGCAATGATACGGTTTTTCATGTTAT 28840
Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728
| ||||| | | || | | | | || || ||||| |||| ||| || |
Sbjct 28839 CGGACCACAGTCCCATATCAACCAGATCCTTGAGAAGCCATGGATTGACAACTTGGAACT 28780
Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788
|||||| | || | ||||| ||| || || ||| ||||| || | | || |||
Sbjct 28779 CTCCAGCAAGAACACGTCGAGAGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTGA 28720
Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848
||| | ||||||| || ||||| |||||||| || || | ||||| || | ||
Sbjct 28719 ATCCAAGAATTTGACTGGTACTGGCAGTTGGCATAGGAGCGACGAGCAAACTGTTGCGGA 28660
Query 75849 GACCATGTGTTCTGATTTTAT-CTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACA 75907
||||||| || | | |||| || || ||||||||||||||| | ||| |
Sbjct 28659 TACCATGTTGAGCAATCTGCTGCTTTAAGCTAGC-CCAATCCCAAAGATCCGTAGGTGTA 28601
Query 75908 ACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCG 75967
||| |||| | || ||||| || || ||| ||| ||| || | || || ||
Sbjct 28600 ACACCCCACATGTCATATTGGAGCTCGCCCTTGGAGGCAGGTGAGCCTTGGTAAGTCTCA 28541
Query 75968 TAAGTCCCGTCCTTTTCAGCTAGTTC---GCAACTCGCCTCTAACGCACCGTAATAAATT 76024
|| || || | | | || | || | || | | || ||| ||| |||||
Sbjct 28540 TATGTACCATGAATCTTTGCCAACTCCATGGAAGCAGTC---AAAGCAGCGTGGTAAATG 28484
Query 76025 GTTTCGAAAATCTTCTTATTAAGAT-CTTGCGCTTCAAGACTATCAAAAGGATAATGTAA 76083
|||||||| || | | || || | |||| || || | || || ||| | | ||
Sbjct 28483 GTTTCGAAGATTTGGATGTTGAGGTGCTTG-GCCTCTGGGGACTCGAATGGAAGACG-AA 28426
Query 76084 AAG--AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 76141
|| || ||| ||||| || || || || || |||| | |||||||||| || | |
Sbjct 28425 GAGCCAAGAAA-GCATCAGCAAGACCTTGGACACCAAGAGCAATAGGTCTGTGGCGGAAA 28367
Query 76142 TTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT 76201
||| || || || || | |||||| || || ||||| ||||| || || | ||
Sbjct 28366 TTGCTCTTTCTTGCCTCGGGCACAGGGTAGTAGTTGATATCGATAATCTTGTTCAAGTTC 28307
Query 76202 CTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCA-TCTA-TCA 76259
|||| || |||| || || | || || | || ||| | | || ||| |||
Sbjct 28306 TTGACGACAACTTGGCAGACCTCGTGAAGCTTCTGGAAGTCATAAGTGGCAGTCTTCTCA 28247
Query 76260 CAAACATATTA----AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTG 76315
||||||| ||||| | ||||| | || ||||| || ||||||| || |
Sbjct 28246 TCAACATATGTTGGGAGAGCCAGCGATGCCAAGTTGCAAACAGCAACCTCATCAGG-TGC 28188
Query 76316 GCA-TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTG 76374
|| |||| | || || || || | || | ||| || |||||||| | |||
Sbjct 28187 ACAGTATTCGACAATTTCAGTACACAAGTTGGAGCTTCGGATGGTACCAAGATTCTTTTG 28128
Query 76375 GTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTG 76434
|||||||||| ||| || | ||||| ||||| | || || ||||||| || | ||
Sbjct 28127 GTTGCTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCAGTCTCGGTTTG 28068
Query 76435 TGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTT--- 76491
| |||| ||||| | ||| | | || || || | ||| | |||
Sbjct 28067 AGCCTCGAGGATAGAGTACCAAAGCTTTTGGGCCTTGATGCTC---TTGCGGCCCTTGCC 28011
Query 76492 CTCTCTTTCATATTGT--GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAA 76549
||| || |||| ||| | | || || ||||| || || | || || |||||
Sbjct 28010 CTCAGACTCGTATTTCTCGTACAAAGCC--TCGAATTCGTCACCGTAGACGTCGGCCAAA 27953
Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT--AACCCGTTTCA 76607
|||||||| ||||| || |||||||||| ||| ||| | ||| || ||| || ||||
Sbjct 27952 CCAGGACACTCATTAGGGCACATCAATGTCCAGTCA--AGGTTCTTTTCAACACGCTTCA 27895
Query 76608 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTC 76667
| |||||||| || ||||| || || || ||||| |||| | | || || ||||
Sbjct 27894 TGAAGAGATCTGGAATCCAGAGGGCGTAGAAAAGATCACGGGCACGAACCTCCTCCTTTC 27835
Query 76668 CTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 76727
| |||||| || || |||||||| | || ||| | |||||||| || || || |
Sbjct 27834 CGTGGTTCTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCGAGGTAGA 27775
Query 76728 TCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTAT 76787
| || | | |||| ||||| || ||||| || ||||| | ||||| || ||||| ||
Sbjct 27774 TGGCGAAAGCACCAGGTCGCTTGTTACCACCTTGATCAACATATCGAGCGGTGTTGTTGA 27715
Query 76788 AAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTC 76847
|||| | | ||| |||| || ||||| || | || ||||| || | ||| ||| |
Sbjct 27714 AAACCCGAAGCATAGGAACGATTCCGTTGGAGTTTCCGTTTGTACCGGCAATGTAAGCAC 27655
Query 76848 CACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAG 76907
|| || || || | || | || || || || ||||| | || || || | |
Sbjct 27654 CAGTGGCGCGGATTCTGTGAACATTGAGTCCGATACCACCTGCGTTCTTTGAAATCATGG 27595
Query 76908 CACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAA 76967
|||| ||||| ||||| ||||| || || || || || ||| |||||| | || |
Sbjct 27594 CACAAATCTTCAAAGTGTCGTAGATACCATCAATGCTGTCCTCCTTCATGTCGATGAGGA 27535
Query 76968 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAG 77027
| || ||| | ||| || || || ||| ||| | ||| || || || || |
Sbjct 27534 AGCATGAAGAAAGTTGTGCCTGTGGTGTACCAGCAGCAAAAAGTGTTGGTGAGGCGTGGG 27475
Query 77028 TGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGAT 77087
|||| | || || | | ||||| ||||| || | || || |||||| |
Sbjct 27474 TGAAGTACTTGCTGGACATCAAGTTGTAAGTTTCGATGGCAGCCTCAATATCCTCGCCGT 27415
Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAG-TCTTATTATTT 77146
| ||||| |||||||||||||| | |||||| || || ||||| ||| |||| ||
Sbjct 27414 GTATTCCGACAGCGACACGCATGATCATATGTTGTGGACGTTC-GCAGATCTTGCCATCG 27356
Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 77206
| | | |||||| || | || || |||||||| || | ||| ||| ||
Sbjct 27355 AGGCGGAGGAGATATGATCGCTCGAGGGTCTTGAAACCAAAGTATTGGTAGTTAAAATCA 27296
Query 77207 CTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATC-CATGAC 77265
| ||||| | || | || || || | | ||| | || | ||| ||| |||
Sbjct 27295 CGGTCGTAGACGATGGCGGAGTTGAGCTCGGCCTCGTGCTTCATGACACAATCGTATGTT 27236
Query 77266 AGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTC 77325
|| | || ||||| || | || |||| ||| || ||||| | |||| ||
Sbjct 27235 TGT-TTGCTGATCATTGGTGACAATTTTTGATTTCGAGGGTTGACATAATGGTATAATTC 27177
Query 77326 TTCCATTACG-TCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTC 77384
|| ||| ||| ||| | || || |||| |||||| || ||||| || || ||||
Sbjct 27176 GGAAATGACGCTCG-AGAATTGCTTCTTGGTTTGCTTGTGGAGGTTCGAGACTGCAATTC 27118
Query 77385 TAGCAGCTAGAATTGCATAGTCAGGATG 77412
| || || || || ||||| || |||||
Sbjct 27117 TTGCTGCGAGGATGGCATAATCGGGATG 27090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712911309837120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |