Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1720 293 2e-74 >seq1720 Length=1085 Score = 293 bits (324), Expect = 2e-74 Identities = 204/229 (89%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 8393 TGCA-ACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGG 8451 |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 623 TGCACACCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGG 564 Query 8452 GATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTT 8511 ||||| ||||| |||||| || |||||||||||||||||||||||||||| |||| Sbjct 563 GATTAAAGGCACGCACCACCATACCCAGCTAATTTTTGTATTTTTAGTAGAGAGCAGGTT 504 Query 8512 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGC 8571 |||||||||| ||||||||||||| |||||||||||||| |||||| ||| ||||||| Sbjct 503 TCACCATGTTCGCCAGGCTGGTCTTAAACTCCTGACCTCA-GTGATCAACCCACCTCGGC 445 Query 8572 CTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCCCTTT 8620 |||||||||||||||||||||||| ||||||||| |||| ||||| || Sbjct 444 CTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACGCCCGGCCCATT 396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521471110307400