Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq778 120 2e-22
seq1113 102 6e-17
seq2459 89.7 4e-13
>seq778
Length=242110
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| || ||||||||||||||||| || ||| ||| || | || ||
Sbjct 99545 ACCAAGTGAAGAGTACTCTCCTTTTGGATGTTATAGTCGCTGAGGGTTCGGCCATCCTCA 99486
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| || || | ||||| || || | || | ||| ||||| |||
Sbjct 99485 AGTTGCTTGCCGGCGAAAATGAGGCGCTGTTGGTCGGGTGGGATACCCTCCTTATCCTGA 99426
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || ||||| | ||||| ||||||| || || ||||||
Sbjct 99425 ATCTTAGACTTCACATTGTCGATTGTGTCTGAAGATTCGACCTCCAAAGTGATGGTCTTT 99366
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || ||||| ||||||||||||||
Sbjct 99365 CCGGTAAGAGTCTTGACGAAGATTTGCAT 99337
Score = 113 bits (124), Expect = 3e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| | |||||||||||||| |||||||||||| ||| || | || ||
Sbjct 99774 CACCAGGTGCAAAGTGCTCTCCTTTTGAATGTTGTAATCGCTGAGGGTACGACCATCCTC 99715
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| |||||| || || |||||||| ||||| ||||||| || | ||| ||||| |||
Sbjct 99714 CAACTGCTTGCCTGCGAAGATCAATCGCTGTTGATCTGGTGGAATACCCTCCTTATCCTG 99655
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || ||||| | || || || || | || || |||||
Sbjct 99654 GATCTTTGACTTGACATTATCAATCGTGTCCGAAGACTCAACTTCTAATGTGATAGTCTT 99595
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| || ||||| |||||
Sbjct 99594 GCCAGTCAAAGTCTTAACAAAGATCTGCAT 99565
Score = 86.0 bits (94), Expect = 5e-12
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| |||||||||||||||| || ||| | || ||
Sbjct 99033 ACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCG 98974
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||| | || || || |||| || | || ||||| |||
Sbjct 98973 AGCTGCTTTCCGGCAAAGATAAGGCGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 98914
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || ||||| | || |||||||| | || || |||||
Sbjct 98913 ATCTTGCTCTTGACGTTGTCGATAGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTA 98854
Query 44309 CCCGTGA 44315
|| ||||
Sbjct 98853 CCGGTGA 98847
>seq1113
Length=83002
Score = 102 bits (112), Expect = 6e-17
Identities = 134/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
||||||||||||| ||||| | || ||| | || || || ||||| || || ||||
Sbjct 57005 CCTTTTGGATGTTATAATCTGACAGAGTGCGTCCATCTTCAAGTTGCTTTCCAGCGAAGA 57064
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
|||||||||| || || | || | || ||||| ||| ||||| ||| || |||
Sbjct 57065 TCAAACGCTGTTGGTCCGGTGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 57124
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || |||||| ||||| ||||| | || || ||||| |||||||||||||| ||
Sbjct 57125 --CGATAGTGTCGCTAGATTCGACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTGAC 57182
Query 44326 GAAG 44329
||||
Sbjct 57183 GAAG 57186
>seq2459
Length=125150
Score = 89.7 bits (98), Expect = 4e-13
Identities = 136/192 (71%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 44126 AACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCG 44185
|| || || ||||| || |||||| ||||||||||| || | || || | ||
Sbjct 17194 AAGACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGACCATCC 17253
Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245
|| || ||||| || ||||||||||||||||| || || | || | || ||||| |||
Sbjct 17254 TCAAGTTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCCGGTGGAATTCCCTCCTTGTCC 17313
Query 44246 GTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303
||||| ||| || ||| | |||||||| | ||| || ||||| | || || |
Sbjct 17314 TGGATCTTGGACTTGACATTGT--CGATGGTGTCCGAGGACTCAACCTCAAGGGTGATGG 17371
Query 44304 TCTTTCCCGTGA 44315
|||| |||||||
Sbjct 17372 TCTTGCCCGTGA 17383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359979032290647
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |