Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1923 131 4e-25 >seq1923 Length=107003 Score = 131 bits (144), Expect = 4e-25 Identities = 274/403 (68%), Gaps = 4/403 (1%) Strand=Plus/Minus Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 |||||||||||||| ||| || ||||||| ||||| | |||||||| ||| Sbjct 7851 CCATCTTTTGGCTGAAGAAGCGGGGCTTGATGCCCGGCCTGACCTTCTCTAACGAACTCA 7792 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355 || |||||||||||||| || || | | || | | || || | || | || || Sbjct 7791 TCTCGCGCGACGAGGGTCTGCA-CACCGACTTTGCCTGCCTGCTGCACTCGCACCTGAAG 7733 Query 230356 AACAA-GCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAA 230414 || || | || | ||| ||||| | ||||| || || || || | ||| | Sbjct 7732 CACCGTGCCAGCAAGC-AGATCATCAAAGACATCATCACCGACGCCGTCACCATCGAGCA 7674 Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGG 230474 ||||||| | || ||| | || ||| || | |||||||||||| || ||| Sbjct 7673 GGAGTTCCTGACCGAGGCTTTGCCGTGTGCTCTACTCGGCATGAACGCTACTCTGATGAA 7614 Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534 |||||||| |||||||| || |||||| | | || || || || ||||||| ||||| Sbjct 7613 GCAGTACATTGAATTCGTCGCTGACCGCCTCCTGGTCGCTCTCGGCAACGAGAAGGTGTA 7554 Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594 ||| | |||||||||| || ||||| ||| || || || ||||||||||| Sbjct 7553 CAAGACGGCCAACCCCTTTGATTTCATGGAAAACATCTCACTGGGTGGCAAGACCAACTT 7494 Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||| || ||||| ||| | || || |||| | | ||||| ||| Sbjct 7493 CTTTGAGAAGCGAGTCGGCGAGTACCAGAAGGCCGGTGTCATG 7451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057796432445420