Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq1923 123 3e-23
>seq1923
Length=107003
Score = 123 bits (136), Expect = 3e-23
Identities = 201/287 (70%), Gaps = 3/287 (1%)
Strand=Plus/Plus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| || || || ||||| || ||| | || ||||| |||||||| || ||||||
Sbjct 8101 ATGTATGTGTCGATCAGCAACGAGTATGTCTCAGAGTGGATGTTCTCCATCATGATCTGA 8160
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591
|| || ||||||||||| || || | | || || || || ||||| || |||||
Sbjct 8161 AACCCGTAGAAGCATCGGGCTTCTGGAACCTGAACCTCGCCGCTGAATCGCTCTACCAGG 8220
Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651
||||| || ||||| |||||| || ||||| || |||| ||||| ||||| |||
Sbjct 8221 TTCTCGTTGACGATGCCGTCAGAGGCGGCAAAGAAAGCCAGGATGTGAGAGATGAAGTAT 8280
Query 16652 TTTTCGTCA-GATGTAA--GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708
|| |||||| || || || ||| |||||| | | ||| || || | ||| | |||
Sbjct 8281 TTCTCGTCATCATTCAATCGATTATTCCAATCGTGCAGATCCTTTGAGAGATCAATCTCT 8340
Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755
|| | ||||| ||| ||| | || || || ||||||| ||||||
Sbjct 8341 TCGGCTGTCCAGAAGGAGGCCTCGGCTTTCTTGTACATTTGCCAAAT 8387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511401397288880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |