Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1923 123 3e-23 >seq1923 Length=107003 Score = 123 bits (136), Expect = 3e-23 Identities = 201/287 (70%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || || || ||||| || ||| | || ||||| |||||||| || |||||| Sbjct 8101 ATGTATGTGTCGATCAGCAACGAGTATGTCTCAGAGTGGATGTTCTCCATCATGATCTGA 8160 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || || ||||||||||| || || | | || || || || ||||| || ||||| Sbjct 8161 AACCCGTAGAAGCATCGGGCTTCTGGAACCTGAACCTCGCCGCTGAATCGCTCTACCAGG 8220 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 ||||| || ||||| |||||| || ||||| || |||| ||||| ||||| ||| Sbjct 8221 TTCTCGTTGACGATGCCGTCAGAGGCGGCAAAGAAAGCCAGGATGTGAGAGATGAAGTAT 8280 Query 16652 TTTTCGTCA-GATGTAA--GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708 || |||||| || || || ||| |||||| | | ||| || || | ||| | ||| Sbjct 8281 TTCTCGTCATCATTCAATCGATTATTCCAATCGTGCAGATCCTTTGAGAGATCAATCTCT 8340 Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 || | ||||| ||| ||| | || || || ||||||| |||||| Sbjct 8341 TCGGCTGTCCAGAAGGAGGCCTCGGCTTTCTTGTACATTTGCCAAAT 8387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511401397288880