Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1154 102 1e-16
>seq1154
Length=35070
Score = 102 bits (112), Expect = 1e-16
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG 145749
||| |||||| | || ||||||||||| |||| |||||| | ||| || ||| |
Sbjct 2813 TCCTCGTGGTCGGCATAAACGTGCGCGTCGCCCATGACGTGAGTCAAGCTGCCAGGCACA 2872
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
|| | | ||| || | ||||| || || || | |||||||| |||||||| |||
Sbjct 2873 AGATCGCACACGTGAGCAATCATGTGTGTGAGAAGCGCATAGCTGGCAATGTTGAACGGC 2932
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850
||||| ||||||||||| | || | |||||||||||||||
Sbjct 2933 ACCCCGAGCCCCATGTCGCAAGACCTCTGGTACAGCTGGCA 2973
Score = 102 bits (112), Expect = 1e-16
Identities = 214/313 (68%), Gaps = 6/313 (2%)
Strand=Plus/Plus
Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928
||||| ||||| ||| || | ||| || ||||||| |||||| | ||| || ||
Sbjct 3065 ACGTAAAACTGAGCAAAG-ACGTGACACGGCGGCAACGCCATGAGGTGCAAATCTCGCGC 3123
Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCA 145987
|||||| ||| | | || || |||| | || | || || | ||| || | || |
Sbjct 3124 GTTCCACGCGCTCATGATGATTCTCC-GATCGTACGGCTTGTTTCTGAGCTTGTCGATTA 3182
Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047
|| |||||| || ||||||| || |||||| ||||| | || |||||| |||
Sbjct 3183 CCTCGGCGAGCTGATCGACGCCCTTGCCAGTGTAATCCGTCTTTGCATCGACGTACTCGG 3242
Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107
| || || || | ||| ||||| ||||| ||||| || || ||||| || | |||
Sbjct 3243 CGCCAAAATGGCGCCATTGGAAGCCGTACACGGGTCCAAGATCCCCAATTTCGCGCTGCG 3302
Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC-- 146165
|| || | ||||||| || ||||| || ||| ||||||| |||||||||||
Sbjct 3303 TGAGGCCCAAGTTGTCGAGGAACTCGCGGGATCCATTGCCGTCCCAAATCTTGACGCCGG 3362
Query 146166 CCTCGCGGAGAGC 146178
| |||| |||||
Sbjct 3363 CGTCGCTCAGAGC 3375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590061797297360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |