Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1154 102 1e-16 >seq1154 Length=35070 Score = 102 bits (112), Expect = 1e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG 145749 ||| |||||| | || ||||||||||| |||| |||||| | ||| || ||| | Sbjct 2813 TCCTCGTGGTCGGCATAAACGTGCGCGTCGCCCATGACGTGAGTCAAGCTGCCAGGCACA 2872 Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || | | ||| || | ||||| || || || | |||||||| |||||||| ||| Sbjct 2873 AGATCGCACACGTGAGCAATCATGTGTGTGAGAAGCGCATAGCTGGCAATGTTGAACGGC 2932 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 ||||| ||||||||||| | || | ||||||||||||||| Sbjct 2933 ACCCCGAGCCCCATGTCGCAAGACCTCTGGTACAGCTGGCA 2973 Score = 102 bits (112), Expect = 1e-16 Identities = 214/313 (68%), Gaps = 6/313 (2%) Strand=Plus/Plus Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 ||||| ||||| ||| || | ||| || ||||||| |||||| | ||| || || Sbjct 3065 ACGTAAAACTGAGCAAAG-ACGTGACACGGCGGCAACGCCATGAGGTGCAAATCTCGCGC 3123 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCA 145987 |||||| ||| | | || || |||| | || | || || | ||| || | || | Sbjct 3124 GTTCCACGCGCTCATGATGATTCTCC-GATCGTACGGCTTGTTTCTGAGCTTGTCGATTA 3182 Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047 || |||||| || ||||||| || |||||| ||||| | || |||||| ||| Sbjct 3183 CCTCGGCGAGCTGATCGACGCCCTTGCCAGTGTAATCCGTCTTTGCATCGACGTACTCGG 3242 Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107 | || || || | ||| ||||| ||||| ||||| || || ||||| || | ||| Sbjct 3243 CGCCAAAATGGCGCCATTGGAAGCCGTACACGGGTCCAAGATCCCCAATTTCGCGCTGCG 3302 Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC-- 146165 || || | ||||||| || ||||| || ||| ||||||| ||||||||||| Sbjct 3303 TGAGGCCCAAGTTGTCGAGGAACTCGCGGGATCCATTGCCGTCCCAAATCTTGACGCCGG 3362 Query 146166 CCTCGCGGAGAGC 146178 | |||| ||||| Sbjct 3363 CGTCGCTCAGAGC 3375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590061797297360