Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 452 4e-122
seq1923 150 2e-31
seq1893 113 4e-20
seq1745 95.1 1e-14
>seq1793
Length=11804
Score = 452 bits (500), Expect = 4e-122
Identities = 1243/1889 (66%), Gaps = 40/1889 (2%)
Strand=Plus/Minus
Query 22105 CTTGTCCACTGTAAACTGTAT-GGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163
|| ||| || || ||||| || |||| ||||| | | ||||| | || |||||||
Sbjct 8578 CTGGTCGACGGTGAACTGGATCGGCGCG-GCGGCAGCCTGCGTGCGCAAGTAGTACATGC 8520
Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223
||||||| ||||||| |||||| || ||| || ||||| || | ||| || | |
Sbjct 8519 CCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATCGAGGTGATTTTGCCCATCGTGG 8460
Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283
| | ||||| | || | |||||| ||| || || || || || || |||||||
Sbjct 8459 GGTCTTTCATGTGGATGTTCAGCGACTGCGACTGGTCAATGAAGGCGCCGCGGTCGGCGG 8400
Query 22284 CCATATTTATCAATGT-ACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342
|||| | | ||| | |||| ||| || ||||| ||||||||||| || | ||||
Sbjct 8399 CCATCTGAA-CAACCTGACGCTGCGAAATCTCCCAAACGGTCTTGTAGAGCGCCTTGATG 8341
Query 22343 TCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTT 22401
|| || || | | || | | |||| ||| ||||| | | ||||| || ||
Sbjct 8340 TCGGCAGGGAT-GTTGGGAATGTTTTGGATGGATCCGTTCTCGGCAATGATGCGGTTCTT 8282
Query 22402 AATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCAC 22461
|| | |||| ||||| ||| ||| || || || |||| || ||||||| ||
Sbjct 8281 CATGGCATCGGACCACAGACCCATGTCGACCAGGTCCTTGAGGAGCCACGGGTTCACGAC 8222
Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521
|| ||||| || | |||||| ||||| ||||| |||||||| ||| | || |||||| |
Sbjct 8221 CTGGAACTCCCCAGCCAAGACACGGCGCTGGTAGATGTTGGACGTGTATGGCTCGAAACA 8162
Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581
|||||||| || || ||||||| |||||| || || ||||| || || | || | ||
Sbjct 8161 CTCATTGTTGCCGAGGATCTGAGAGGTCGAGGCCGTGGGCATGGGAGCAAGCAACAAGGA 8102
Query 22582 GTTTCTCAAGCCGTGCT--TTGAAATTTTACTC-TTGAGCATCGACCAGTCCCACAGATC 22638
||| | | || |||| |||| ||| ||| || || | ||| |||||||| ||
Sbjct 8101 GTTGCGGATACCATGCTCCTTGA---TTTGCTCCTTCAGATTGTCCCATTCCCACAGTTC 8045
Query 22639 GGACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGGCTG 22696
|| ||| | || || |||||| || | || | | || | ||| || ||
Sbjct 8044 AGAAGGCTTGACGTT---CCACATGTCAAACTGGAGAATACCCTCCGAG--GCAGGTGAT 7990
Query 22697 CCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCG 22756
||||| | || || ||||| | | |||||| || | ||| ||| | |
Sbjct 7989 CCTTCAAAGGTGGAATAAGGACCCTGCTCCTTGGCAAGCTCCATGGACGCAGTCAAGGAG 7930
Query 22757 CCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTC 22812
||| || | |||||||| || | ||||||||| || || || ||| ||
Sbjct 7929 GCGTGGTAGACGGTCTCGAAAATCTGCTTGTTCAACTCACGAGCCTCGGGTGAC----TC 7874
Query 22813 GTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGG 22872
| |||| ||| | | ||| ||||| || | ||||||||| || | |||||| ||
Sbjct 7873 AAAGGGCAGACGGAGAGCGAGGAAGGCGTCGGCAAGACCCTGAACACCGACACCGATGGG 7814
Query 22873 TCGGTTTTTCAGATTCGACACTTTTGC----CTCGGGCAAAGGATACCAATTCGAATCGA 22928
|| || || || || |||| ||| ||| || || || ||||
Sbjct 7813 TCTGTGGCGCATGTTG----CTGTTGCGAGCCTCCTGCACGGGGTAATGGTTGACGTCGA 7758
Query 22929 TTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGT 22988
| | |||| | ||| | | ||| | | || | | |||||| |
Sbjct 7757 TGATCTTGTTTAGGTTGCGGACCACGACCTGAGTCACGTCATGCAGCTTCTGAAAGTCAT 7698
Query 22989 AAAC-GCCCGATTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGG 23045
| ||| ||||| ||||||| | ||||| ||| ||||| ||||| ||||
Sbjct 7697 ATCGAGCCTCGTTGTAGTCAACAAAGGCAGGAAGGGCGAGCGAAGCAAGGTTGCAGACGG 7638
Query 23046 CCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCG 23105
|||||||||| || | ||| || | ||| || || || ||||| || | || |
Sbjct 7637 CCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAGAGATTAGAACTTCTGATGG 7578
Query 23106 TGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCG 23165
| || | || |||||||||| || ||||| | |||||||||||||||| | ||
Sbjct 7577 TTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGT 7518
Query 23166 TGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTC 23225
|||| ||||| ||| | || | || | ||| | |||| ||| | | |||
Sbjct 7517 TGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGAGCTTCTGGGCGCGGATG-GTC 7459
Query 23226 GCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAA 23284
|| ||| ||| || ||||||||||| ||||| || ||||| || |||| ||
Sbjct 7458 TTGCGACCCTTGCCCTCACGCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCACCATAG 7399
Query 23285 CAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCA 23344
|||||||| |||||||| | | | |||||||||||| |||| || || ||
Sbjct 7398 CAGTCGGCAAGGCCGGGGCACTCATTGGGACACATGAGAGTCCAGTCGCCGTTCTTCTCG 7339
Query 23345 ACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACC 23404
|| || |||| || ||||| || ||||| || ||| ||| || || || ||||| |||
Sbjct 7338 ACACGCTTCATGAAGAGATCAGGGATCCACAGGGCGAGGAAAAGGTCCCGCGCGCGAACC 7279
Query 23405 TCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGC 23464
||||| |||||| |||||| | || | || || || || || || ||||| |||
Sbjct 7278 TCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAACTCAAAGACATCAGCGTGCCAAGGC 7219
Query 23465 TCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCC 23524
|| ||||| | |||||| || || |||| ||| ||||| ||||| || || || | ||||
Sbjct 7218 TCCAGGTAGATGGCAAAGGCACCTGGTCGCTTGTTGCCACCCTGGTCTACATATCTGGCC 7159
Query 23525 GTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCC 23584
||||||||| |||||| ||||| || | || || ||||| | ||| ||| ||
Sbjct 7158 GTGTTGTTGAACACTCGGAGCATGGGAATGACGCCATTGGAAGTACCGTTGGTGCCAGCA 7099
Query 23585 ACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTC 23644
| || || | || || | | ||| |||| || || ||||| || || |||
Sbjct 7098 ATGTATGAGCCAGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCGCCAGCCATTTTG 7039
Query 23645 GATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTC 23704
|| ||||| ||||| || || ||||| |||||||||||||||||||| || || |
Sbjct 7038 GAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCGATGCTGTCATCCTTCATG 6979
Query 23705 GCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGG 23764
|||| | ||| || || |||| || || | ||| ||| | || ||| || |||||
Sbjct 6978 TCGACGAGGAAGCAGGATGACAGCTGGGCCTGGGGAGTACCAGCATTGAAAAGGGTCGGA 6919
Query 23765 CTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATG 23824
|||||| || ||| | | ||||| || |||||||| || ||| || ||||||
Sbjct 6918 GAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTTGTACGTTTCAATGACGCGCTCAATG 6859
Query 23825 TCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTG 23884
| || || || |||| ||||| ||||| ||||| | || |||| |||||| |
Sbjct 6858 TTGTCGCCCCAGATGCCGACAGCGACACGCATAATCATATGCTGGGGTCGCTCGACAATC 6799
Query 23885 ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAG 23944
|||||| | || | || || || || | || || || || ||||| || | ||
Sbjct 6798 TTGCCGTTGAGCTTCAGGAGGTACGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAA 6739
Query 23945 TTAAAGTCACGATCGTGCACTATGGCCGA 23973
|| ||||| | |||| |||||||| ||
Sbjct 6738 TTGAAGTCTCTGTCGTAGACTATGGCAGA 6710
>seq1923
Length=107003
Score = 150 bits (166), Expect = 2e-31
Identities = 319/473 (67%), Gaps = 16/473 (3%)
Strand=Plus/Minus
Query 57963 TTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT 58022
|||||| || | || |||| || ||||| || || || || ||||| ||| ||||
Sbjct 7915 TTCGCCCAGCGATTAGTCGCCTTTGCCGCTGTTGAGGGCATCTTCTTCAGCGGCGCCTTT 7856
Query 58023 GCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082
|| | || |||||| ||||||| || ||| |||||||||||||||| || |||||
Sbjct 7855 GCCTCCATCTTTTGGCTGAAGAAGCGGGGCTTGATGCCCGGCCTGACCTTCTCTAACGAA 7796
Query 58083 TTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATT 58142
| || ||||||||||||||||| || || || ||||| ||||| || |||| ||| |
Sbjct 7795 CTCATCTCGCGCGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTGCACTCGCACCT- 7737
Query 58143 GTCAATAAACCGACGCGG------GATCGCATCTTGGACATTATCACCGAGGCGGTCGCG 58196
| |||| | | ||| |||| ||||| |||||||| || ||| |
Sbjct 7736 ---GAAGCACCGTGCCAGCAAGCAGAT--CATCAAAGACATCATCACCGACGCCGTCACC 7682
Query 58197 ATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGAT 58256
||||| | ||||| | ||||| || | ||| || | ||||| |||||| | |
Sbjct 7681 ATCGAGCAGGAGTTCCTGACCGAGGCTTTGCCGTGTGCTCTACTCGGCATGAACGCTACT 7622
Query 58257 TTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAG 58314
||||| |||||||||| || || || ||| | || || ||| || | |||
Sbjct 7621 CTGATGAAGCAGTACATTGAATTCGTCGCTGACCGCCTCCTGGTCGCTCTCGGCAACGAG 7562
Query 58315 AGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCA 58374
| || ||||| ||| || || |||||||| ||| | ||||| || | ||||
Sbjct 7561 AAGGT--GTACAAGACGGCCAACCCCTTTGATTTCATGGAAAACATCTCACTGGGTGGCA 7504
Query 58375 AGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427
|||| ||||| || || || ||| |||| || || || ||| || |||
Sbjct 7503 AGACCAACTTCTTTGAGAAGCGAGTCGGCGAGTACCAGAAGGCCGGTGTCATG 7451
>seq1893
Length=9943
Score = 113 bits (124), Expect = 4e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| |||||||| ||||| || || ||||| || |||||| | || || || | ||
Sbjct 575 CATGCAGATTTTCGTGAAGACACTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCATC 634
Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
||||| |||| | ||||| || ||| | ||||||||| ||| | || || ||||
Sbjct 635 CGACACCATCGACAATGTCAAGTCAAAGATTCA-GGACAAGGAGGGCATCCCTCCGGACC 693
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
||||||| || || ||||||||||| || | ||||| ||| || ||| || |
Sbjct 694 AGCAGCGACTGATTTTCGCTGGCAAGCAACTCGAAGATGGCCGTACTCTGTCCGACTACA 753
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||| || || ||||| || || ||||| || ||
Sbjct 754 ACATCCAGAAGGAATCTACGCTGCATCTCGTCCT 787
Score = 105 bits (116), Expect = 6e-18
Identities = 145/200 (73%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| ||||| ||||| ||||| || || ||| |||| ||||| | ||||||| | | |
Sbjct 889 TCGTCAAGACCCTGACTGGCAAGACCATTACCCTCGAGGTTGAGTCCTCCGACACTATTG 948
Query 31263 AAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
| | ||||| || ||| | ||| |||||||| | || || |||||||| |||||
Sbjct 949 ACAACGTCAAGTCAAAGATTCA-GGATAAGGAAGGGATCCCTCCGGACCAGCAACGTCTG 1007
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381
|| ||||||||||| || | ||||| || | ||| || |||||||||||
Sbjct 1008 ATTTTCGCTGGCAAGCAACTTGAAGATGGGCGCACCCTCTCCGACTACAACATTCAAAAG 1067
Query 31382 GAATCGACTCTTCATCTGGT 31401
||||| || |||||| ||||
Sbjct 1068 GAATCAACACTTCATTTGGT 1087
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||||||||| || || || |||||||||| || || ||| | || || ||| |
Sbjct 1106 CATGCAAATTTTTGTCAAAACCTTGACAGGCAAGACAATTACCTTGGAGGTGGAATCCAG 1165
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | | || | ||||| | ||| || |||||||| | || || || ||
Sbjct 1166 TGATACTATTGACAACGTCAAGTCTAAAATTCAAGATAAGGAAGGTATTCCTCCGGATCA 1225
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||| ||||| || || ||||| || ||||||||||| | ||| |||||||||| ||
Sbjct 1226 GCAACGTCTCATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACTCTGAGCGATTACAA 1285
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||| || || || || || ||||| || ||| | ||| | || ||
Sbjct 1286 CATCCAGAAGGAGAGCACCCTGCATCTCGTTCTTCGCCTGCGTGGAGG 1333
>seq1745
Length=53961
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| || || ||||| || || ||||||||| |||| || || |
Sbjct 17233 AAGATGCAGATCTTCGTCAAAACCCTGACGGGGAAGACGATCACCCTCGAGGTGGAGTCT 17174
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| | || | ||||| | || |||||||||||| | || || ||
Sbjct 17173 TCCGACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGAT 17114
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||||| || || || |||||||||||| | || || || ||||||| ||
Sbjct 17113 CAGCAGCGACTCATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 17054
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||||||| || || || || || |||| || ||||| | || ||
Sbjct 17053 AACATTCAGAAGGAGAGCACCCTCCACTTGGTGCTGCGACTGCGCGGGGG 17004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445755066389280
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