Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1793 98.7 2e-15 >seq1793 Length=11804 Score = 98.7 bits (108), Expect = 2e-15 Identities = 417/655 (64%), Gaps = 8/655 (1%) Strand=Plus/Minus Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451 ||| ||||| ||| ||| || || ||||||| |||| |||||| || |||| | ||| Sbjct 7453 ACCCTTGCCCTCACGCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCACCATAGCAGTC 7394 Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---AC 94508 || |||||| |||||||| | ||| ||||| || | ||| | || |||| || Sbjct 7393 GGCAAGGCCGGGGCACTCATTGGGACACATGAGAGTCCAGTCG---CCGTTCTTCTCGAC 7337 Query 94509 TCTCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATC 94568 | || |||||||||||||| | ||| | || ||||||| |||| || | | || Sbjct 7336 ACGCTTCATGAAGAGATCAGGGATCCACAGGGCGAGGAAAAGGTCCCGCGCGCGAACCTC 7277 Query 94569 TTCATTACCGGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCAGA 94628 || || ||| ||||| | ||| | || || || || |||||| Sbjct 7276 CTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAACTCAAAGACATCAGCGTGCCAAGGCTC 7217 Query 94629 AATATAGATGGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGA 94688 | |||||||| || ||| | ||||| || |||||| || | | | | | Sbjct 7216 CAGGTAGATGGCAAAGGCACCTGGTCGCTTGTTGCCACCCTGGTCTACATATCTGGCCGT 7157 Query 94689 GACGTTAAAGATTTGGAGGAACGCCATGAGACCAGGGTGGGTACCACTCCATGAC-GAAA 94747 | ||| || | | |||| | | |||| ||| | ||||| | || | | || Sbjct 7156 GTTGTTGAACACTCGGAGCATGGGAATGACGCCATTGGAAGTACCGTTGG-TGCCAGCAA 7098 Query 94748 TGGGGCTTCCTTTTGCCCTCAAATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGG 94807 || || | || | | || | || || ||| | || ||||| | |||| Sbjct 7097 TGTATGAGCCAGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCGCCAGCCATTTTGG 7038 Query 94808 AGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGC 94867 |||| || || ||| || || ||||| || ||||| ||||| ||||| | | | Sbjct 7037 AGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCGATGCTGTCATCCTTCATGT 6978 Query 94868 CCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGG 94927 | | |||||||| || || || |||| | || ||| ||| || || || || | Sbjct 6977 CGACGAGGAAGCAGGATGACAGCTGGGCCTGGGGAGTACCAGCATTGAAAAGGGTCGGAG 6918 Query 94928 AAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGT 94987 | || ||||| || | | || |||||||| | || ||||||||||| | |||| Sbjct 6917 AGGCGTGGGTGAAGAACTTGCTGGACATGAGGTTGTACGTTTCAATGACGCGCTCAATGT 6858 Query 94988 CTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTCAAC 95042 || ||||||||||| |||||||||||||| | ||| || ||||| || Sbjct 6857 TGTCGCCCCAGATGCCGACAGCGACACGCATAATCATATGCTGGGGTCGCTCGAC 6803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989558210822470