Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 98.7 2e-15
>seq1793
Length=11804
Score = 98.7 bits (108), Expect = 2e-15
Identities = 417/655 (64%), Gaps = 8/655 (1%)
Strand=Plus/Minus
Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451
||| ||||| ||| ||| || || ||||||| |||| |||||| || |||| | |||
Sbjct 7453 ACCCTTGCCCTCACGCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCACCATAGCAGTC 7394
Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---AC 94508
|| |||||| |||||||| | ||| ||||| || | ||| | || |||| ||
Sbjct 7393 GGCAAGGCCGGGGCACTCATTGGGACACATGAGAGTCCAGTCG---CCGTTCTTCTCGAC 7337
Query 94509 TCTCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATC 94568
| || |||||||||||||| | ||| | || ||||||| |||| || | | ||
Sbjct 7336 ACGCTTCATGAAGAGATCAGGGATCCACAGGGCGAGGAAAAGGTCCCGCGCGCGAACCTC 7277
Query 94569 TTCATTACCGGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCAGA 94628
|| || ||| ||||| | ||| | || || || || ||||||
Sbjct 7276 CTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAACTCAAAGACATCAGCGTGCCAAGGCTC 7217
Query 94629 AATATAGATGGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGA 94688
| |||||||| || ||| | ||||| || |||||| || | | | | |
Sbjct 7216 CAGGTAGATGGCAAAGGCACCTGGTCGCTTGTTGCCACCCTGGTCTACATATCTGGCCGT 7157
Query 94689 GACGTTAAAGATTTGGAGGAACGCCATGAGACCAGGGTGGGTACCACTCCATGAC-GAAA 94747
| ||| || | | |||| | | |||| ||| | ||||| | || | | ||
Sbjct 7156 GTTGTTGAACACTCGGAGCATGGGAATGACGCCATTGGAAGTACCGTTGG-TGCCAGCAA 7098
Query 94748 TGGGGCTTCCTTTTGCCCTCAAATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGG 94807
|| || | || | | || | || || ||| | || ||||| | ||||
Sbjct 7097 TGTATGAGCCAGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCGCCAGCCATTTTGG 7038
Query 94808 AGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGC 94867
|||| || || ||| || || ||||| || ||||| ||||| ||||| | | |
Sbjct 7037 AGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCGATGCTGTCATCCTTCATGT 6978
Query 94868 CCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGG 94927
| | |||||||| || || || |||| | || ||| ||| || || || || |
Sbjct 6977 CGACGAGGAAGCAGGATGACAGCTGGGCCTGGGGAGTACCAGCATTGAAAAGGGTCGGAG 6918
Query 94928 AAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGT 94987
| || ||||| || | | || |||||||| | || ||||||||||| | ||||
Sbjct 6917 AGGCGTGGGTGAAGAACTTGCTGGACATGAGGTTGTACGTTTCAATGACGCGCTCAATGT 6858
Query 94988 CTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTCAAC 95042
|| ||||||||||| |||||||||||||| | ||| || ||||| ||
Sbjct 6857 TGTCGCCCCAGATGCCGACAGCGACACGCATAATCATATGCTGGGGTCGCTCGAC 6803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989558210822470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |