Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 208 1e-48
seq1923 96.9 4e-15
>seq1793
Length=11804
Score = 208 bits (230), Expect = 1e-48
Identities = 625/950 (66%), Gaps = 30/950 (3%)
Strand=Plus/Minus
Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008
|| || || || || ||||| ||||| | | | | |||| || ||||| |||||
Sbjct 7656 GAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAG 7597
Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068
|||||| || |||| ||||||| || | || || ||||| ||||| || ||||||
Sbjct 7596 AGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCC 7537
Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63128
|| || || ||||| || | || || ||| |||||| ||| | ||| | | ||||| |
Sbjct 7536 TTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGA-G 7478
Query 63129 ACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT----TCGTA--TAGAGTATAC 63182
|| | | || | ||| | |||| | || ||||| | ||| |
Sbjct 7477 CTTCTGGGCGCGG--ATGGTCTTGCGAC-CCTTGCCCTCACGCTCGTACTTTTCGTACAG 7421
Query 63183 AATCGTTCGAACTCGTCTCCCCAAA-CATTGTCCAAT-CTAGGACATTCATCCGGACACA 63240
| | || ||||| ||| ||| | || | ||| | || || |||| |||||||
Sbjct 7420 AGCC--TCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACA 7365
Query 63241 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63300
| | | ||| || |||| | || || || ||||| ||||||||||| ||||| || |
Sbjct 7364 TGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGG 7305
Query 63301 CTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 63360
| | || || || | | | | ||||| || || ||||| || |||||||
Sbjct 7304 CGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGA 7245
Query 63361 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 63420
|| | | | ||||| ||||| || |||| ||| ||||| | | || || || ||||
Sbjct 7244 ACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCACCTGGTCGCTTGT 7185
Query 63421 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 63480
| || ||||| |||| ||||| || ||||| || | |||| | ||| ||||| | |
Sbjct 7184 TGCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGC 7125
Query 63481 CGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAAT 63538
| || || |||| ||||| || | || || ||| ||||||| || | |
Sbjct 7124 CATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTGGACGT 7065
Query 63539 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATA 63598
|| || || || || || |||||||| ||||| | ||||| || | |||||||||
Sbjct 7064 TG--AGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATA 7007
Query 63599 GATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63658
|||||| || ||||| ||||| |||||| | || || ||| |||| ||| |
Sbjct 7006 GATGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTGGGCCTG 6947
Query 63659 AGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63718
| ||| || ||||| || | ||| ||||| ||||| || || | || || | ||
Sbjct 6946 GGGAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAG 6887
Query 63719 ATTGTACGTCTCAAT----AGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACA 63773
|||||||| ||||| ||| | | | | || || |||| || || ||||||
Sbjct 6886 GTTGTACGTTTCAATGACGCGCTCAATGT-TGTCGCCCCAGATG----CCGACAGCGACA 6832
Query 63774 CGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGAT 63833
||||| | ||| ||||| |||| || ||||| ||| ||| | |||| | ||| |||
Sbjct 6831 CGCATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTACGAT 6772
Query 63834 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63883
|||| ||| || || ||||| || | ||| ||||||| |||||
Sbjct 6771 CGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTCTCTGTCGTA 6722
>seq1923
Length=107003
Score = 96.9 bits (106), Expect = 4e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| || || ||| ||||||||||||||| | || | ||||||||| || || ||
Sbjct 7755 CAGGCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGTTCGTTAGAGAAGGTCAGG 7814
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|||||||| | ||| ||||| || |||||||| ||||| || || | ||| ||||||
Sbjct 7815 CCGGGCATCAAGCCCCGCTTCTTCAGCCAAAAGATGGAGGCAAAGGCGCCGCTGAAGAAG 7874
Query 33702 ATTCCTTCTACTGCAGCAAAGGC 33724
|| || || || || ||||||||
Sbjct 7875 ATGCCCTCAACAGCGGCAAAGGC 7897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629801586887520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |