Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 215 7e-51
>seq1793
Length=11804
Score = 215 bits (238), Expect = 7e-51
Identities = 623/947 (66%), Gaps = 24/947 (3%)
Strand=Plus/Minus
Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 65801
|| || || || || ||||| ||||| | | | | |||| || ||||| |||||
Sbjct 7656 GAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAG 7597
Query 65802 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 65861
|||||| || |||||||||||| || | || || ||||| ||||| || ||||||
Sbjct 7596 AGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCC 7537
Query 65862 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 65921
|| || || ||||| || | || || ||| |||||| ||| | ||| | | ||||| |
Sbjct 7536 TTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGA-G 7478
Query 65922 ACTCGAGCCTTTATTATAGATTTGTATCTCTTT---TCTCTTTCGTATAGTGTATACAAT 65978
|| | | || | ||| | ||| || | ||||| | ||||
Sbjct 7477 CTTCTGGGCGCGG--ATGGTCTTGCGACCCTTGCCCTCACGCTCGTACTTTTCGTACAGA 7420
Query 65979 CGTTCGAACTCGTCTCCCCAAA-CATTGTCCAAT-CCAGGACATTCATCCGGACACATCA 66036
|| ||||| ||| ||| | || | ||| || || || |||| |||||||| |
Sbjct 7419 GCCTCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACATGA 7362
Query 66037 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 66096
| ||| || |||| | || || || ||||| ||||||||||| ||||| || || |
Sbjct 7361 GAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGGCGA 7302
Query 66097 TAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 66156
|| | || | | | | ||||| || || ||||| || |||||||||
Sbjct 7301 GGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAACT 7242
Query 66157 CCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 66216
| | | |||| ||||| || |||| ||| ||||| | | || || || ||||| |
Sbjct 7241 CAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCACCTGGTCGCTTGTTGC 7182
Query 66217 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 66276
| ||||| |||| ||||| || ||||| || | |||| | ||| ||||| | ||||
Sbjct 7181 CACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGCCAT 7122
Query 66277 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAA--TTGA 66334
|||| ||||| ||||| || | || || ||| | ||||| || | ||||
Sbjct 7121 TGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTGGACGTTGA 7062
Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394
| || || || || |||||||| ||||| | ||||| || | ||| ||||||||
Sbjct 7061 --GGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGAT 7004
Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 66454
|||||| || || |||||| |||||| | || || ||| |||| ||| |
Sbjct 7003 GCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTGGGCCTGGGG 6944
Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514
||| || ||||| || | ||| ||||| ||||| || || | || || | || ||
Sbjct 6943 AGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTT 6884
Query 66515 GTACGTCTCAAT----AGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGC 66569
|||||| ||||| ||| | | | | || || |||| || || |||||||||
Sbjct 6883 GTACGTTTCAATGACGCGCTCAATGT-TGTCGCCCCAGATG----CCGACAGCGACACGC 6829
Query 66570 ATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTT 66629
|| | ||| ||||| |||| || || |||||| ||| | |||| | ||| |||
Sbjct 6828 ATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTACGATCGC 6769
Query 66630 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 66676
|||| ||| || || ||||| || | ||| ||||||| |||||
Sbjct 6768 TCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTCTCTGTCGTA 6722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658156065956560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |