Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 244 1e-59
seq1923 95.1 2e-14
>seq1793
Length=11804
Score = 244 bits (270), Expect = 1e-59
Identities = 632/949 (67%), Gaps = 28/949 (3%)
Strand=Plus/Minus
Query 71704 GATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAA 71763
|| || || || || ||||| ||||| | | ||| |||| ||||| || |||||
Sbjct 7656 GAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAG 7597
Query 71764 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 71823
|||||| || |||||||||||| || | || || ||||| ||||| || ||||||
Sbjct 7596 AGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCC 7537
Query 71824 TTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 71883
|| || || || || || | || || ||| |||||| ||| | ||| | | ||||| |
Sbjct 7536 TTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGA-G 7478
Query 71884 ACTCGAGCCTTTATTATATTCTTGTATCTCTTT---TCTCTTTCGTATTGT--GTATATA 71938
|| | | || ||||| | ||| || | ||||| | | ||| | |
Sbjct 7477 CTTCTGGGCGCGG--ATGGTCTTGCGACCCTTGCCCTCACGCTCGTACTTTTCGTACAGA 7420
Query 71939 ATCGTTCGAACTCGTCTCCCCA-AGCATT-GTCTAATCCAGGACATTCATTCGGACACAT 71996
| || ||||| ||| ||| |||| | | | | || || || ||||| ||||||||
Sbjct 7419 GCC--TCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACAT 7364
Query 71997 CAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 72056
| | ||| || || | | | || || ||||| ||||||||||| ||||| || ||
Sbjct 7363 GAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGGC 7304
Query 72057 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 72116
| || || || | | | | |||||| || || ||||| || ||||||||
Sbjct 7303 GAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAA 7244
Query 72117 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTT 72176
| | | | ||||| ||||| || |||| ||| ||||| | | || || || |||||
Sbjct 7243 CTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCACCTGGTCGCTTGTT 7184
Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236
|| ||||| |||| ||||| || ||||| || | |||| | ||| ||||| | ||
Sbjct 7183 GCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGCC 7124
Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATT 72294
|||||| | ||| ||||| || | || || ||| ||||||| || || ||
Sbjct 7123 ATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTGGACGTT 7064
Query 72295 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 72354
| || || || || || |||||||| ||||| | ||||| || | ||| ||||||
Sbjct 7063 G--AGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAG 7006
Query 72355 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 72414
|||||||| || || |||||| |||||| | || || ||| |||| ||| |
Sbjct 7005 ATGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTGGGCCTGG 6946
Query 72415 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 72474
||| || ||||| || | ||| ||||| ||||| || || | || |||| ||
Sbjct 6945 GGAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGG 6886
Query 72475 TTGTACGTCTCAAT----AGCTGATTCTATATC-CCATTGATGTATTCCTACCGCGACAC 72529
|||||||| ||||| ||| | | | | || || |||| || || |||||||
Sbjct 6885 TTGTACGTTTCAATGACGCGCTCAATGT-TGTCGCCCCAGATG----CCGACAGCGACAC 6831
Query 72530 GCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATT 72589
|||| | ||||||||| |||| || || |||||| || | |||| | ||| |||
Sbjct 6830 GCATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTACGATC 6771
Query 72590 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 72638
|||| ||| || || ||||| || | ||| ||||||| |||||
Sbjct 6770 GCTCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTCTCTGTCGTA 6722
>seq1923
Length=107003
Score = 95.1 bits (104), Expect = 2e-14
Identities = 194/286 (68%), Gaps = 7/286 (2%)
Strand=Plus/Plus
Query 42335 TATGTATCGATCA--AAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAA 42392
||||| ||||||| || || ||| | || || || ||||| || || |||||||
Sbjct 8104 TATGTGTCGATCAGCAACGAGTATG--TCTCAGAGTGGATGTTCTCCATCATGATCTGAA 8161
Query 42393 ATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAAT 42452
| |||||||| |||| ||| || | |||||| || || | ||||| || | | |
Sbjct 8162 ACCCGTAGAAGCATCGGGCTTCTGGAACCTGAACCTCGCCGCTGAATCGCTCTACCAGGT 8221
Query 42453 TTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATT 42512
| ||||| || || |||||| ||| ||||| || |||| | || || || ||||
Sbjct 8222 TCTCGTTGACGATGCCGTCAGAGGCGGCAAAGAAAGCCAGGATGTGAGAGATGAAGTATT 8281
Query 42513 TTTCGTCCGGTGTTAAT---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTT 42569
| ||||| | ||| ||||||||||| | | ||| || || | ||| | ||||
Sbjct 8282 TCTCGTCATCATTCAATCGATTATTCCAATCGTGCAGATCCTTTGAGAGATCAATCTCTT 8341
Query 42570 CTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGAT 42615
| | ||||| || || || || || || || ||||| | ||| ||
Sbjct 8342 CGGCTGTCCAGAAGGAGGCCTCGGCTTTCTTGTACATTTGCCAAAT 8387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671122136285840
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