Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1689 181 2e-41
seq1111 147 3e-31
>seq1689
Length=56064
Score = 181 bits (200), Expect = 2e-41
Identities = 205/272 (75%), Gaps = 2/272 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || || | ||| |||||| || |||||||| || ||||||||||| || |
Sbjct 10730 CGCCAAGCGCCACCGAAAGAT-TCTTCGTGACAACATCCAGGGCATCACCAAGCCTGCCA 10788
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || ||||||||||| ||||||||| | || | || |||| |||||||
Sbjct 10789 TCCGACGTCTTGCACGTCGTGGTGGTGTCAAGCGTATTTCAGCCATGATCTACGAAGAGA 10848
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| |||| | |||| |||||| | || |||| ||| ||| || || ||||
Sbjct 10849 CCCGCACTGTTCTCAAGACTTTCCTCGAAGGTGTCATCCGTGACGCTGTCACGTACACCG 10908
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| ||||| || |||||||| ||| | || |||||||||| ||||| || || |
Sbjct 10909 AGCACGCAAAACGCAAAACTGTCACTTCCCTCGACGTCGTCTATGCCTTGAAGCGACAGG 10968
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
|||| | | || |||||||| ||||| ||
Sbjct 10969 GCCGCACCCTCTACGGTTTTGGTGGTTAAACT 11000
>seq1111
Length=246067
Score = 147 bits (162), Expect = 3e-31
Identities = 195/268 (73%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || || | ||| |||||| || ||||||||||| ||||| || || || ||
Sbjct 176998 GCCAAGCGCCACCGTAAGAT-TCTTCGTGACAACATCCAAGGCATCACGAAACCTGCCAT 177056
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | ||||| ||||||||||| || |||||||| | |||| || |||| |||||||
Sbjct 177057 CAGACGTCTCGCTCGTCGTGGCGGCGTCAAGCGCATATCTGCCATGATCTACGAAGAGAC 177116
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| ||| | |||| || ||| | || |||| || || || || |||||
Sbjct 177117 CCGTACTGTCCTTAAGACGTTTCTCGAAGGAGTGATCCGCGACGCCGTCACATACACCGA 177176
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| ||||| ||||| ||||| || |||| |||| || |||||||| | |||||
Sbjct 177177 ACACGCCAAACGAAAGACAGTCACATCATTGGACGTCGTGTACGCATTGAAGAGGCAAGG 177236
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | | ||||| || || |||||
Sbjct 177237 TCGTACGTTGTATGGATTCGGTGGTTAA 177264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79073340299562
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |