Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 210 3e-49
seq1923 91.5 2e-13
>seq1793
Length=11804
Score = 210 bits (232), Expect = 3e-49
Identities = 623/948 (66%), Gaps = 26/948 (3%)
Strand=Plus/Minus
Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957
|| || || || || ||||| ||||| | | | | |||| || ||||| |||||
Sbjct 7656 GAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAG 7597
Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017
|||||| || |||| ||||||| || | || || ||||| ||||| || ||||||
Sbjct 7596 AGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCC 7537
Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077
|| || || ||||| || | || || ||| |||||| ||| | ||| | | ||||| |
Sbjct 7536 TTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGA-G 7478
Query 63078 ACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT----TCGTATAGTGTATACAA 63133
|| | | || | ||| | |||| | || ||||| | ||||
Sbjct 7477 CTTCTGGGCGCGG--ATGGTCTTGCGAC-CCTTGCCCTCACGCTCGTACTTTTCGTACAG 7421
Query 63134 TCGTTCGAACTCGTCTCCCCAAA-CATTGTCCAAT-CCAGGACATTCATCCGGACACATC 63191
|| ||||| ||| ||| | || | ||| || || || |||| ||||||||
Sbjct 7420 AGCCTCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACATG 7363
Query 63192 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63251
| | ||| || |||| | || || || ||||| ||||||||||| ||||| || ||
Sbjct 7362 AGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGGCG 7303
Query 63252 ATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 63311
| || || || | | | | ||||| || || ||||| || |||||||||
Sbjct 7302 AGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAAC 7243
Query 63312 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 63371
| | | ||||| ||||| || |||| ||| ||||| | | || || || |||||
Sbjct 7242 TCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCACCTGGTCGCTTGTTG 7183
Query 63372 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 63431
|| ||||| |||| ||||| || ||||| || | |||| | ||| ||||| | ||
Sbjct 7182 CCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGCCA 7123
Query 63432 TTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTG 63489
|| || |||| ||||| || | || || ||| ||||||| || | |||
Sbjct 7122 TTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTGGACGTTG 7063
Query 63490 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGA 63549
|| || || || || |||||||| ||||| | ||||| || | |||||||||||
Sbjct 7062 --AGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGA 7005
Query 63550 TACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 63609
| ||||| ||||| ||||| |||||| | || || ||| |||| ||| |
Sbjct 7004 TGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTGGGCCTGGG 6945
Query 63610 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 63669
||| || ||||| || | ||| ||||| ||||| || || | || || | || |
Sbjct 6944 GAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGT 6885
Query 63670 TGTACGTCTCAAT----AGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACG 63724
||||||| ||||| ||| | | | | || || |||| || || ||||||||
Sbjct 6884 TGTACGTTTCAATGACGCGCTCAATGT-TGTCGCCCCAGATG----CCGACAGCGACACG 6830
Query 63725 CATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTT 63784
||| | ||| ||||| |||| || || |||||| ||| | |||| | ||| |||
Sbjct 6829 CATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTACGATCG 6770
Query 63785 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63832
|||| ||| || || ||||| || | ||| ||||||| |||||
Sbjct 6769 CTCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTCTCTGTCGTA 6722
>seq1923
Length=107003
Score = 91.5 bits (100), Expect = 2e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| || || ||| ||||||||||||||| | || |||||||| || || || ||
Sbjct 7755 CAGGCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGTTCGTTAGAGAAGGTCAGG 7814
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|||||||| | ||| ||||| || |||||||| ||||| || || | || ||||||
Sbjct 7815 CCGGGCATCAAGCCCCGCTTCTTCAGCCAAAAGATGGAGGCAAAGGCGCCGCTGAAGAAG 7874
Query 33424 ATTCCTTCTACTGCAGCAAAGGC 33446
|| || || || || ||||||||
Sbjct 7875 ATGCCCTCAACAGCGGCAAAGGC 7897
Score = 86.0 bits (94), Expect = 8e-12
Identities = 192/286 (67%), Gaps = 7/286 (2%)
Strand=Plus/Plus
Query 33574 TAAGTATCGATCA--AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAA 33631
|| || ||||||| || || ||| | || || || ||||| || || |||||||
Sbjct 8104 TATGTGTCGATCAGCAACGAGTATG--TCTCAGAGTGGATGTTCTCCATCATGATCTGAA 8161
Query 33632 ATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAAT 33691
| |||||||| |||| || || | || ||| || || | ||||| || ||| |
Sbjct 8162 ACCCGTAGAAGCATCGGGCTTCTGGAACCTGAACCTCGCCGCTGAATCGCTCTACCAGGT 8221
Query 33692 TTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATT 33751
| || || || || |||||| ||| ||||| || |||| | || || || ||||
Sbjct 8222 TCTCGTTGACGATGCCGTCAGAGGCGGCAAAGAAAGCCAGGATGTGAGAGATGAAGTATT 8281
Query 33752 TTTCGTCTGGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTT 33808
| ||||| | | | ||||||||||| | | ||| || || | ||| | ||||
Sbjct 8282 TCTCGTCATCATTCAATCGATTATTCCAATCGTGCAGATCCTTTGAGAGATCAATCTCTT 8341
Query 33809 CCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGAT 33854
| ||||||| || || ||||| || || || ||||| | ||| ||
Sbjct 8342 CGGCTGTCCAGAAGGAGGCCTCGGCTTTCTTGTACATTTGCCAAAT 8387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622931361567440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |